YALI0D16907g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D16907g

Location

Species Yarrowia lipolytica Positions 2088591..2090772
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2182 (nuc.)
Previous locus YALI0D16885g Next locus YALI0D16929g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D16907g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D16907gYALI0D16907g_mRNA-001YALI0D16907g_CDS-001

Nucleotide sequence

 

>YALI0D16907g
ATGGGCCTCCTGGCCTCCGTTGCCGATGCCAAAGACAACACTCGTCATACCGTGCAGCAG
ATTACTGCCTATTGTGTGAGTGAAGACGATAACCCCCACCGATTCCCGTTTTGATGACCC
CGCCCCCAAACTAACACAGAACACTGCAAAGTACAACGAGTGCCACGCGGCTGCGGCAAA
CAACTACCTGGCCTGCGCCGAGAACGACGTCAACTGCCGTTGCACCCAGCTCCAAGTCCT
GGCCGACGTCTGTGCACCCCTTTGCCCTCAGGTGAGTACCTCTCTTTCCCCCATCTGTGC
CGCCCCACTACACAACACGGTCTTTGTGTTTGTATTTGTTCGCACTGTGTTTGTGCACAG
CAATGCCTACTAACCCCAGACTGAAGTTTCCAACGCCGAGCTCATCCGATCCTACTGCGC
CCAGAGCACCCTGCAGAGCTACTCCTCTGCCTCTGTCGCTGCCGCAGGCTCTGCTAACGA
CGTCCACTCCAACTCTCTGATGGAGCTGAAGAAGAAGCTCAAGGAAAAGCTCTTCGGCAA
GTTTAAGGATGAAGACCCAGATTGCCCTGACGACAAGCACGAGGATCATGGTGATGATTG
CCCCGAGGACAAGCACAACAACGACCAGAGCGATGACGGCATGTACGATGACTGTCACGA
TAAGTGCGACGGGGACGATCATCACGATGATTGCGACAACAAGTACGACGAGGATGACGA
GGACGATTGTGACGATAAGTACGATCACGACGATCACCACGAGGATGACTGCGATGAGAA
GTACGACGGAGAAGACGACGATTGCGACGAGGAGTGCGATGAGTACGACCACCACGACGA
CTGTGCCCAATACTACTCATACGCGAACCAGTCTGACTCTCCCTCGCCTTCTTCCGCTCC
CTCTCCGCAGCCAGAGTCTGACGAGTCCCCCGCCCTTTCGGTTCAGTCTAAAAACTTCCT
TGCCATGATGAGTGCCTACGAAAAGGACTCTAGCGACCACGCTTCCATCCCTGGCCGTTT
CCATCGACGAAGTACCATTGAGAGGCTCAAGGCCACCGCTAGCCGTGGTGGTAACCAGCA
GCTCCACATTGTCCCCCGAGGCCTCGACCTTCTTGACGTTGATGAGCCCAATGCCCGCCT
CTTCCGAGACTTTCTCCCCTCCAGTATGGATCCCGACTGCGATGGGGATGACGACGAGGA
CTGCGTGATTGACGGTTTGGATCCCTCTTTATACGAGGATGTTGATTTCGATTCTCTTCA
AGACCAGCGTGCCTCTGCCAATATCATTGGCTGGCCCAGCATCCCCTGGCCCTGGAACGA
CGACGACCAGCAGGACGACGACTGCGAGGACGACAAGACCCCCGAGCATACCCCTGTTGA
CGATGACTGCGGTGACGAGGAAAAAGACCAGTGGAACACCCCCTCCACCGATGACGATTG
CGGCGACGAAGAGAAGGATCAGTGGAACGCCCCCTCTTACGACGATGACGACTGCGGTGA
CGAGGACAAGAGCCAGTGGAACACGCCTTCTATCGACGACGATTGCGGTGACGAAGATAA
GGACCAATGGAACTCTCCTTCCGAAGCCGACGACGACTGTGGCGAGGATAGCGACAAGTC
GTGGAACGACCACTCTGGCGACGGCGACGACGACTGTGGCGACGATTCTGACAAGCAGCC
CTCCTACGACAAGTCGAAGCACAAGGTCTCTGGTCCCGACGCCGATGCTGACGAGACCCA
TGGGGACGATGGGGACGATGGCGATGACTCTGATGGCCATGGCGACGACGGCTCTGGCTC
TGATGACGACGCTGATGACGGCTCTGAGGGTGATTCCGAGGAAGACGGTTCTGACACTGA
CACCAAGGTTGACGGTGGGGAGGGCAAGAATGCCACCGAGGGCTCTCGGCAGGGTCTCCG
AAACGCCATCAAGAATGTGGGCGCCAACATCCGGAATGCAACTGGCAGCGGCGTCGAGTC
GTCGGCGACTTCTGTCGTGCGGCAGGGTATGGTTGAGGTGATTGTTGGTTTCGCAGCCGC
GGCCGGTGTTGGTTTTGCTCTGATTTAGAGAGACACCTTGCACTTTTATACCCCCATTTT
TTCCTAAAACTCTAGCGTGAGACCACTGTTGCAATGAAGCTGTGTAAATAAATTCAATGC
TCAAATTTCTAATGTGGCCACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D16907g_CDS-001

Protein length: 632 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D16907g_CDS-001 MGLLASVADAKDNTRHTVQQITAYCNTAKYNECHAAAANNYLACAENDVNCRCTQLQVLA
DVCAPLCPQTEVSNAELIRSYCAQSTLQSYSSASVAAAGSANDVHSNSLMELKKKLKEKL
FGKFKDEDPDCPDDKHEDHGDDCPEDKHNNDQSDDGMYDDCHDKCDGDDHHDDCDNKYDE
DDEDDCDDKYDHDDHHEDDCDEKYDGEDDDCDEECDEYDHHDDCAQYYSYANQSDSPSPS
SAPSPQPESDESPALSVQSKNFLAMMSAYEKDSSDHASIPGRFHRRSTIERLKATASRGG
NQQLHIVPRGLDLLDVDEPNARLFRDFLPSSMDPDCDGDDDEDCVIDGLDPSLYEDVDFD
SLQDQRASANIIGWPSIPWPWNDDDQQDDDCEDDKTPEHTPVDDDCGDEEKDQWNTPSTD
DDCGDEEKDQWNAPSYDDDDCGDEDKSQWNTPSIDDDCGDEDKDQWNSPSEADDDCGEDS
DKSWNDHSGDGDDDCGDDSDKQPSYDKSKHKVSGPDADADETHGDDGDDGDDSDGHGDDG
SGSDDDADDGSEGDSEEDGSDTDTKVDGGEGKNATEGSRQGLRNAIKNVGANIRNATGSG
VESSATSVVRQGMVEVIVGFAAAAGVGFALI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG