YALI0D16885g

Overview

Description weakly similar to uniprot|P53886 Saccharomyces cerevisiae YNL172w APC1 subunit of anaphase-promoting complex (cyclosome)
Locus type CDS
Locus tag YALI0D16885g

Location

Species Yarrowia lipolytica Positions 2083592..2088239
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 4648 (nuc.)
Previous locus YALI0D16874g Next locus YALI0D16907g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D16885g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D16885gYALI0D16885g_mRNA-001YALI0D16885g_CDS-001

Nucleotide sequence

 

>YALI0D16885g
ATGGCACAACTGCAGCTGGCGACGTTACAGCTGTCGGAGAGCTCGAATGACAAGTGTACC
ACGGTGGCGACTTCCAGCCAGGGCGATCTGGTGGTCGAAACCAACAATGTCAAGTGGTTC
AAGTCCGGCAGGTTGTTTCGCAGCTTTTGTTTCGACGACCAGGAGGTGATTTACGCGTCG
TTCGTGTCGTTCGATAGCGTGGGACCCTCCGACGAGAATCACGTGTCCACGGTAATTGTT
CTGAAAGACAGCATTCACATTTACAACGAGTTCAGAGGCACTTCGGTACTGTGGTTGCCG
TTTGTGGTGACCAATGCTCTGCAGTTCGCCAAGGGCCTCATTCTCCAAAGAGACACTCGA
CGATCTGGCAAGTCGCTTAATGGACCGCGATTTCTCACTCTCATTGACCCGCTCATGGAC
TTTGGACTGGTAGTCACTACAGACCTGTCTTCCATCTCTCCCAGTGAATGTCTTGTGAGT
GTGGCCAGATCGCCCAATTCGTCATTGTATCTCACACACAGTCCCACAGACGGCCGATTC
GTTATTTACCACTCCCGGCAACTTACACACAGCAAAAAGTACTCGAAAACCAGCCGCCAC
AGCTCTACTAGGCGCAGATCGAGCTCAATCTTCCCCAGGAGTGACGATCAGCTCAGCGAC
AATGACATGAGCACCAACCTGGAAAACACGCTGGCGTACTCGCGTGGCGAGAAGGCGATT
GCATTAGACCGAATGAGTTCTGGAGGAGACGCCGGCAACGACGGAGAGTACACGAATTAC
GACTTTTCATCGTTAAGAAAAGATATCATGCTCACCGAAGTCAAGGCTATCGATACTGAA
CCCGTGCAGGTGAGCGATGTGGTTGCGCAGCAACTAAGCTTCTTTGACCGCGAAGCTATC
GTTATTTTCAACCGAAAGACGAATGTGCTGCAGGTGCACATGTTTGTCAAGGCATCTGGA
CCCGTGGAACGACCCCAGCCAATCGATGCAGTCGAGTACCACGTCAAGGATCTTATCATA
AACACAGATTGCTCGGCAGCTGAGGGATGCACCATCCTGGTTCGTGATTCGAACGACAGG
GTTGTTCTTCTCAATCCATTTGTCGGAGTCAGTGTCCCTCTCGACATTTGCTGCTCAAAC
TCAGAGCAGCTTTCCTGGTCGGGCACCAACCGTGTTAAATGTGGTTCCATTGATAAGTTG
CTTGTTCTCGAGCCCAAGACCCACCTCATGAACAATTGTCTCAATCTCTTGAGCATCTTC
TTTGATGGGAACAGCTACGAGATCCTGAGACTTCGGTGGGCCCTTGCATACTCGCAGTTT
TACGGCGACGAGCTCACTGCGTTCACTACTGTTGTTGCCAGTGTCATTTCCGAGTTTTCC
TCTCTCTCTAGCCTGGATGAGGAGAATGGCGATTCGTCTCAGATCACTTTTCAGAGCAGT
GTATGGGATTGGGTGGCTGAGAGCACGCCTAAAAAACGCAGCCCAGTCTTCACCAGAAAG
GTGGTGGATACTGCTCACCAGCTGGTGGAGGAGCTTCCCATTGACTCGAGCATCGAACGG
GTCACTTACTTGACTCTGGCACTGCACATTTTCCGAGAGGATCGCAAGCTCGACATTTCC
TGTTCAGAAGATGTCAAGTGGCTAGGTGAACTTGTGGGTCAACTGGTGACATCTCTGAAA
TGGCCTGACTCTTGGTGTCACTACTACGGCGTCGATATCAATCAAGGTGGTGAGTATTTC
AAATATGGCATGTTCTTGTCTACAATAACTAACACAGAACAATTTGTGCCCCCGCTGGCT
GAGCCCCCGAATCTGCTGGCTTCACTTGCGGCTCTTTGTTACAAGGTGGATACTGACTAT
GTGTGTCTGTCAGCTCTTGTTGGAGGGGAATCCACTCTTGATGAGGAACTCACTCCCTGC
ACACAGGTGGCTATCAAGGCGTTTGAGCTTCTGTCCATGGATCTGCCAACTGCCGAAGAC
TTTGTGCACCTTCTGATCGAGGCTGGTCTCACCAAACAGATGCTGGCTCGGTTCCCCGAG
GGTGTCGCCATCCCCATTCTCAATGTGATTCACATGTGCAAGTCCGAAAGTCCCATTTCA
AGTGACCCGGCGTTCCTGGAGCTCATTGATAGAGACGATCTGGCTCGCGTGGCTCAGGGG
GTCGAGCATGTGAACCTCAAGCCAGTTCAATCTGGCACTTCTGGCGGAGCTCGTGAGATT
CAGGGTATTCTTGCATCACTGAACAACCCCGAAGCTACCAGTGCGTGGGACGAACAGGTT
GAGGCCGACCGAGTGGCGGTGGCTAGACAGGTATTTAGCAGTGATAGACGGTTCTACGAG
GCGTCCAAGCTGCTTCAGACATCCAAGGTGCAGTCGACGACCCTTGTCATCCCCCCTGAC
TGCAACGAACATGAGGCTCTGACGTTGCAAAAGGAGGTGGCAAAGACCATCGCTATGCGA
ACATTTACTGTTCCTCTTGGTCGAAGTTCGCTGTTCTTCTCTGCACGTGTTCCTCTCACC
ACCGAGCGGTTCCCCATTCCCAAACTCAACTTCAACGTGTTGCTGCGACCAGACAATGTC
ACTGTTCCCCTCGATAAGTCACTGTTGAGTGAAGATAGCACCGCCTGGGGATACTTCCAC
AATGGTGTGTCTTCGGGCTTGAGTGTCTCTAGAGGAGCTCGCGACATTAGCGGCAACTGG
GTGGCGTTCAACCGACCCCAACAGCTGAATGCTCAACACGCGGGCTTCCTTTTGGGTCTG
GGACTCAACGGACACATGAAGAATGTCGAGGAGTGGCACATTTTTAACTACCTCGGCCCA
AAACATACTCTGACGAGCATTGGACTGCTCCTAGGAATGTCTGTGTCTCTAATGGGCACC
ATGGACGCCAAACTCACCAAAGTTCTCTCTGTCCATATTGGTGCTCTTTTGCCTGTGGGC
TCGAATGATCTTAATGTTGGTGGTTCCATGCAGACTGCTGGTCTCGTTGGTATTGGCTTC
TTGTACCTCGGCTCTCAGCACCGTCGAATGACTGAGATGCTTGCTGGTGAGATTGGAAGA
GATGCTACTGATGGAGATGTCATTCTCGATGAAGGATATCGTCTAGGAGCCGGTATTTCG
CTCGGTCTAATCAATCTCGGTGAAGGGGAGGCGTTTAGCAAGGGAGCAACTACCTCCAAG
CTCATTTCTCTCGCTACTCCTATACGAGACATCCAGAATCCCAACTTCCTCGATTCTCCC
ACCTCTGGAGCTATATATGCGCTCATGCTCATTTTCATGAAGACCAACAACCAGGGCATT
GCATCGAAACTAGTTCCTCCAGAATCGGAGCCCATGTTGGAGTACGTGCGACCCGACCTT
TTGCTTCTACGAGCTCTTGCTGCCAATATTATCATGTGGGACCAGATTGGCTCCAGTGTG
TCATGGGTCGAAGGCCAGATCGCTTCTTCGCTGCGTCGAAAGTACACGCTCAAGTCGATC
AAGACGCTCAATTCCGATATGCTCAGTTACATGAACATCATTGCTGGTAACTGTTTCGCC
TTGGCGCTGAAACATGCTTCCACTGCCAACGAGCACGCCAAGTCGACTCTGTTGCATTAT
CTTGATGAGTTTATGCGTCTGGCGACTCTTCCTACTGAGTCCCATGACCAGAAACTAACT
CAACTTGGAGTGATCAACACCCAAGATTGTCTGGCTCTATCACTGGCCATCGTCATGGTT
GGCACTGGTGACCTGGATACTTTCCGGCGTCTCCGAATCCTGCACGGACGAGCAGGTTCA
GAAGTGCCGTATGGCAGCTTCATGGCTACTCATCTGGCCATGGGTACTCTGTTCCTAGGA
GGAGGCCAATTCGCATTCGCTCGCTCGAACCTGGCCATCGCATCCCTACTGATTGCCTTC
TACCCTCTGTTTCCGTCTTCCATGCAGGACAACAGAAGCCATCTGCAGGCTCTTCGGCAT
TTCTGGGTGCTTGCAGCCGAGCCTCGATGTCTGATTGTCCGAAACATCAGCAACGGCCAG
AGTTGTTCCGAATCAGTCACCGTCACGCTCAAGGACGGACCTCCCGTTGTCTGCCAGGCC
CCCTGCTTGTTGCCTGAACTAGACACGATCAAGGCACTAGCAATCACGGCTCCTCATGTT
CTTCCTGTTCATATCGACTTTGAGGAGAGCCCCGCGTACCTGGAGTCGTTCAAGAAGACC
CAAACCATCTACGTGAAGAATGTGTCTGACGAAACCAGCCATATCCCTGCTGGTGTAGCT
CTCAGAAGCGACAGCGATCACTTTGAGGTCAACAATGACACTCTTAGTGGCAAGCTTCTC
AGGTTGCAGGTGTTCCAAAAGTCTGCCAACCGGGACCTGGCCCTGTTTTCCAACCACGCT
GCTTCCTCGGCTCACGTGGGCAGCTTGGCTCCTCTTCTGGCTGACATGCAGTATACGCTG
GAGTTGACGGCCACCAACCCCACCCTGTTTGATGATATGTGGAATCTGAGACTGCTGATT
GCCCACTACAGTGGAATTGACTCGTCTCAGGCGACCTTCTTGCCCCCGGTATGTGTGGAG
AAGCTGAAGTTGCTGCTCAGAGGAGCCAGGGCTAAGATGGTTAGCTAGCTATTTATTAAG
ATGAATTTCATGATGATCACGACACTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D16885g_CDS-001

Protein length: 1520 aa.
Product: Conserved hypothetical protein

>YALI0D16885g_CDS-001 MAQLQLATLQLSESSNDKCTTVATSSQGDLVVETNNVKWFKSGRLFRSFCFDDQEVIYAS
FVSFDSVGPSDENHVSTVIVLKDSIHIYNEFRGTSVLWLPFVVTNALQFAKGLILQRDTR
RSGKSLNGPRFLTLIDPLMDFGLVVTTDLSSISPSECLVSVARSPNSSLYLTHSPTDGRF
VIYHSRQLTHSKKYSKTSRHSSTRRRSSSIFPRSDDQLSDNDMSTNLENTLAYSRGEKAI
ALDRMSSGGDAGNDGEYTNYDFSSLRKDIMLTEVKAIDTEPVQVSDVVAQQLSFFDREAI
VIFNRKTNVLQVHMFVKASGPVERPQPIDAVEYHVKDLIINTDCSAAEGCTILVRDSNDR
VVLLNPFVGVSVPLDICCSNSEQLSWSGTNRVKCGSIDKLLVLEPKTHLMNNCLNLLSIF
FDGNSYEILRLRWALAYSQFYGDELTAFTTVVASVISEFSSLSSLDEENGDSSQITFQSS
VWDWVAESTPKKRSPVFTRKVVDTAHQLVEELPIDSSIERVTYLTLALHIFREDRKLDIS
CSEDVKWLGELVGQLVTSLKWPDSWCHYYGVDINQGEQFVPPLAEPPNLLASLAALCYKV
DTDYVCLSALVGGESTLDEELTPCTQVAIKAFELLSMDLPTAEDFVHLLIEAGLTKQMLA
RFPEGVAIPILNVIHMCKSESPISSDPAFLELIDRDDLARVAQGVEHVNLKPVQSGTSGG
AREIQGILASLNNPEATSAWDEQVEADRVAVARQVFSSDRRFYEASKLLQTSKVQSTTLV
IPPDCNEHEALTLQKEVAKTIAMRTFTVPLGRSSLFFSARVPLTTERFPIPKLNFNVLLR
PDNVTVPLDKSLLSEDSTAWGYFHNGVSSGLSVSRGARDISGNWVAFNRPQQLNAQHAGF
LLGLGLNGHMKNVEEWHIFNYLGPKHTLTSIGLLLGMSVSLMGTMDAKLTKVLSVHIGAL
LPVGSNDLNVGGSMQTAGLVGIGFLYLGSQHRRMTEMLAGEIGRDATDGDVILDEGYRLG
AGISLGLINLGEGEAFSKGATTSKLISLATPIRDIQNPNFLDSPTSGAIYALMLIFMKTN
NQGIASKLVPPESEPMLEYVRPDLLLLRALAANIIMWDQIGSSVSWVEGQIASSLRRKYT
LKSIKTLNSDMLSYMNIIAGNCFALALKHASTANEHAKSTLLHYLDEFMRLATLPTESHD
QKLTQLGVINTQDCLALSLAIVMVGTGDLDTFRRLRILHGRAGSEVPYGSFMATHLAMGT
LFLGGGQFAFARSNLAIASLLIAFYPLFPSSMQDNRSHLQALRHFWVLAAEPRCLIVRNI
SNGQSCSESVTVTLKDGPPVVCQAPCLLPELDTIKALAITAPHVLPVHIDFEESPAYLES
FKKTQTIYVKNVSDETSHIPAGVALRSDSDHFEVNNDTLSGKLLRLQVFQKSANRDLALF
SNHAASSAHVGSLAPLLADMQYTLELTATNPTLFDDMWNLRLLIAHYSGIDSSQATFLPP
VCVEKLKLLLRGARAKMVS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG