YALI0D16929g

Overview

Description weakly similar to uniprot|P36056 Saccharomyces cerevisiae YKL155c CAP1 putative cytochrome c oxidase
Locus type CDS
Locus tag YALI0D16929g

Location

Species Yarrowia lipolytica Positions 2090779..2092654
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1876 (nuc.)
Previous locus YALI0D16907g Next locus YALI0D16940g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D16929g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D16929gYALI0D16929g_mRNA-001YALI0D16929g_CDS-001

Nucleotide sequence

 

>YALI0D16929g
ATGCTACGAATCGCGAACGTGTTCAAGAGCGGCGCCAGGGCGCAGCTGCTACCCGGCAGA
GTCTCTGTCCAACTTGCTCCTGTCCGACACAGCTCCACAGGCAATCTTAGCAGCCACATG
AAGGATAACATGGAAGCTGATCTGGTCGCCACCCACGGCCAGAATCACAACAATGTCCAC
GAGTACGAAGACAACCGTCCGGAGCGACATCATCCCGACACTATTGCTGCTCGAGCTGCG
CATATGTTTTCTGTGCCCAAACACCTGGATCGCGCCATGGCAGACGCTCTGCAGACCAAG
GACATGTCTCCTGCCACTCTCAAGCGAAACGTTGCACAGTTTTACGGAGGCAGCGATGAG
CTGGTATCCAAGATGGAGACGGGAAGAGACAACCCGCTTGAATCTGCGCTCACCGTGGCC
GCGGCCACCCTGCATCAAAACTACGCATCCGCATATGCTGTTTTGAAGGAGGTCCGGCAG
AAGATGCCAGAGGGATGGACTCCCAACTCTGTGCTGGATGTGGGTCTCGGAGCTTCTGCT
GGAATGCTTGCCGTCAATGAGCTGTTTGCCGAGGAGGAAAACTGGAACCCTGACCGGAAA
ACGGCGGTTATTCTCGGTCCTAGAGTCAACACTTTGCTGACCAAACAGTTTTTTGATACC
CAGAAACACGAGGACCAGGGCCAGAACAACTTCAAAGACAAGGTGCGAAACACCCGGCTC
CAGACTGGTCTCCCAAAGAACAACCTGTACAAGTACGACCTCATCATTGCCAACCAGCAG
CTTGATCTCATGGCGCGACAGGAGGATTCCACCCTAGAGATGCTCTCTGCTCGACTGGTG
GACCTCCTGAGCCCCGGAGGAGTGCTTGTTCTGGTCGACAGAGGCAACCCCAACGGATAC
GAGCGAATAGCACGAGCTAGAGAGGTGCTGATTCGACCCATGGGCGATACGGGGCCGGTC
AAGACTCCCGTGCCCTTTGGACGGACCCGAAAACTGCATTTCTCCAACGACACGGAGATG
AAGAAGCTCAAGCAGGAGCTGGGACCCGAATTCGACATCGAGGAGCAAACCATGCCCGTC
CAAGACCGCATCTATCTCCACATTGTCGCTCCCTGCACACACCACGGAAAGTGCCCCTTC
CAGCAGGGCCAGCTAAGAAAACAAAACACAGCCAAGGGCTCCTGGTGCTCCTTCACCCAG
AAACTCGCCCGACCAGAGTACGTGATGCAGCTCAAACGAGGAAAGGCCCTGGCGGCTTCG
TGGGACCCCAACGTGACTCGAAACAAGAACAAATTCTCAGGAGGAGGCCGACCTGGCTCT
TCAGATCTCGAGGTGCCTTCGTTCAGCTACCTCATCATCCAGCGATCCACAACGCCCGAA
GTCAACATCCCCAACATCCAAAAATGGCCCCGAATCCTCAAACCTCCCATGAAGAGAAAG
AATCACGTCATCATGAACATCTGTGGACCCGAGGGAGGCCTCCACTCCTGGACCGTCACC
AAATCTCAGGGTAAACAGGAGTACCTGGACGCGAGAAAGGCGCTCCAGAGAGACCAGTGG
GCGTTGGACGCCAAGGTAAAGACCCCTGTGCGAAAGAACTACCAGATGGCGCTGGAAGAC
GAGAAAATCTCTCGAAACCCTTCTGCCCAGGAAAAGATTAACAAGGTGACTGCGCTGTCC
ACCACCCAGAGACGAGACCTCGTCAAGGCCGAGCGACGAAAGCAGATCAAGAGAGCTCGA
AGAGAGGCAAGATTGGGCGGCCAGCTGGAACCCAAAAAGGACGACGAAGAAGACGACCAG
GAGTGATCACGCAAACCACCCCCTAACAATACCTGTACATACTTACATAATAACAATGCA
ACAACATAGATATCAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D16929g_CDS-001

Protein length: 602 aa.
Product: Conserved hypothetical protein

>YALI0D16929g_CDS-001 MLRIANVFKSGARAQLLPGRVSVQLAPVRHSSTGNLSSHMKDNMEADLVATHGQNHNNVH
EYEDNRPERHHPDTIAARAAHMFSVPKHLDRAMADALQTKDMSPATLKRNVAQFYGGSDE
LVSKMETGRDNPLESALTVAAATLHQNYASAYAVLKEVRQKMPEGWTPNSVLDVGLGASA
GMLAVNELFAEEENWNPDRKTAVILGPRVNTLLTKQFFDTQKHEDQGQNNFKDKVRNTRL
QTGLPKNNLYKYDLIIANQQLDLMARQEDSTLEMLSARLVDLLSPGGVLVLVDRGNPNGY
ERIARAREVLIRPMGDTGPVKTPVPFGRTRKLHFSNDTEMKKLKQELGPEFDIEEQTMPV
QDRIYLHIVAPCTHHGKCPFQQGQLRKQNTAKGSWCSFTQKLARPEYVMQLKRGKALAAS
WDPNVTRNKNKFSGGGRPGSSDLEVPSFSYLIIQRSTTPEVNIPNIQKWPRILKPPMKRK
NHVIMNICGPEGGLHSWTVTKSQGKQEYLDARKALQRDQWALDAKVKTPVRKNYQMALED
EKISRNPSAQEKINKVTALSTTQRRDLVKAERRKQIKRARREARLGGQLEPKKDDEEDDQ
E*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG