YALI0D16874g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D16874g

Location

Species Yarrowia lipolytica Positions 2082254..2083215
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 962 (nuc.)
Previous locus YALI0D16863g Next locus YALI0D16885g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D16874g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D16874gYALI0D16874g_mRNA-001YALI0D16874g_CDS-001

Nucleotide sequence

 

>YALI0D16874g
ATGCAAGTTCACGCACCAAAACCACGGATATACGCCACTCCTTCGAATGCCGACATTCTT
CTTGTGGCAGTTGCCTCGGTCAAATTGAGCCAGGCGGTTTTATTCCACAAATCAGTTCAC
AGATGGCTCACCACTAGGCGAACGGCGCATCGTGCCTTTCTACCGCTACCCTGTCCACCT
ACAAACGCCACCTTTGCTGTCGACAGGTTTCTGACACATGCCCCAGAGGGATATGCCAAG
TACAATCCTCGATGCGGGATCAATCGTCTTCTGCACAGGTACTTGTCTAGTGCAGTGTGT
GAGGTTCGGGGCCAGCTCAGGTGCGGCCATGTGATGCCCGTGATGAACCTATGGCGCTTT
GCATTGAATGAGTGTCTCAAGCGATACGGAAAGACGTTTTCTACGCCCTTGGGGCCTCTG
CTGAACGTGGGACTGTGCAAAAGACTCGATATTTTGGTGATCAAGTTGCCTACCAAGGAC
GATGGAATGTTGATTTGTGAGTAACGAGGATTCAAACGGACGAGCCTGAATGATTCACAC
GGAGACGCCTGCCTCCATCATGACACCCTGTTCCCCTCCCATTCACTAACCCAGCTTGCA
TCCAACACCTAATCTCGCTGCTCACTTCTAACTGCCTCGCAACACCCAAAGAGGAGCGTC
TAGTTGCCACCTACATCTGCGTACTTCTTCCGCGAGTCATTGAGCATCTTGCTCATCATC
CTGCTTCTCCCCAGCTAGAAGCCACCCTGCGCTCAGCTCTGAGATGGGCTAGAGCATACT
CTTAGTTCACGATGTTGACCTCTCGCTCAACTGTGAAACTTCACATTGTCTTCAGACGTC
GTCAACCACCTATTTACCCTCGGCCATAATGACTGCAAAGTTGTCAACAAACTGTCATGA
CGATAAGTTTCTGCTCAGCCTCTTTACAGTCGCCTACATTGTCTAAGAATATTCCTTTTA
TT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D16874g_CDS-001

Protein length: 229 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D16874g_CDS-001 MQVHAPKPRIYATPSNADILLVAVASVKLSQAVLFHKSVHRWLTTRRTAHRAFLPLPCPP
TNATFAVDRFLTHAPEGYAKYNPRCGINRLLHRYLSSAVCEVRGQLRCGHVMPVMNLWRF
ALNECLKRYGKTFSTPLGPLLNVGLCKRLDILVIKLPTKDDGMLISCIQHLISLLTSNCL
ATPKEERLVATYICVLLPRVIEHLAHHPASPQLEATLRSALRWARAYS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG