YALI0D16863g - CKII

Overview

Description uniprot|Q6C8U8 Yarrowia lipolytica YALI0D16863g CKII Caseine kinase II alpha subunit
Locus type CDS
Gene name CKII
Locus tag YALI0D16863g

Location

Species Yarrowia lipolytica Positions 2080966..2082276
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1311 (nuc.)
Previous locus YALI0D16841g Next locus YALI0D16874g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D16863g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D16863gYALI0D16863g_mRNA-001YALI0D16863g_CDS-001

Nucleotide sequence

 

>YALI0D16863g
ATGGACGTGGATTCCGATATCGCCGCCGAGTCGGTGGCCCGAGTGTACGCGGACGTGAAC
AACCTGATGCCGCCATCGTACTGGGACTACGACAAGCTGGCGCTCAAATGGGGTCAGCAG
GACAACTACGAAATCATCAAGAAAATCGGCCGAGGCAAATACTCGGAGGTGTTTGAGGGC
ATCAACATTGTGTCCAAAGAGCTGGTGGTGATCAAGGCGCTCAAGCCCGTCAAGCGCAAG
AAGATCAAGCGAGAAGTCAAGATTCTGCAAAATCTCGCAGGAGGACCCAACATCATCTCG
CTGCTGGAAACGGTGCGAGACCCGCAGAGCAAAATGCCGGCCTTCATCTTCGAACACGTG
CAGAACCTCGACTTCCGGGCGCTGTACCCCAAATTCACAGACTATGACATTCGCTACTAC
ATGTACGAGCTGCTAAAGGCCATCGACTACAGCCACTCCAAGGGCATCATGCACCGGGAC
GTGAAGCCACACAATGTCATGATTGACCACGAGAAGCGCAAGCTGCGCCTCATTGACTGG
GGCTTGGCCGAGTTCTACCACGCGGGCACCGAATACAACGTCAGAGTGGCCTCGCGGTAC
TTCAAGGGACCCGAGCTGCTGGTCGACTTCCAGCTCTACGACTACTCCTTGGACCTGTGG
TCCTACGGCGCCATGTTTGCCTCCATGATTTTCAAAAAGGAGCCTTTCTTCCATGGTACC
TCCAACACGGACCAGCTGGTGAAAATCGCACGGGTGCTGGGAACAGAAAAGCTCTGGGAC
TATCTGGAAAAGTACAATATTGAGCTCGGAGCCGAGTACGACGACATTGGAACCTACCCC
GCCCGACCCTGGAGCAAGTTTGTCAACGTGGACAACGAGGCCTACATTAGCCAAGAAGCG
ATACATTTACTGGATAACCTGCTGAGATACGACCATCAGGAGAGACTGACTGCCAAGGAG
GCCATGGCGCACGATTACTTCAAGCCCGTCAGAGTTAGAGAAGAGGGCGAGCAGGAATAG
ATGGCGAGCAGGAATAGATGACGAGCAGCTCTATTGGGTCGTCTACCAACGGCCGCGAGC
GAGCAAAGGTGAGACACATGGGCCCCCCCATCGATTCGCCAACCAGTCTTGAGCGCGTGT
ATTAATGAGCTAACTTGCACTACACGCGCTTGCTAAGCTATGACTCAGTGACTTCCAGTG
ACTCCAACATTTCTGTCACCACTGGACCAAACATTAATTCAACTCATGCTCAAAGAGACA
GTCATTGAAGGGTGTATATCGGTACTTTAATAAAAGGAATATTCTTAGACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D16863g_CDS-001

Protein length: 340 aa.
Product: Caseine kinase II catalytic subunit
Gene: CKII

>YALI0D16863g_CDS-001 MDVDSDIAAESVARVYADVNNLMPPSYWDYDKLALKWGQQDNYEIIKKIGRGKYSEVFEG
INIVSKELVVIKALKPVKRKKIKREVKILQNLAGGPNIISLLETVRDPQSKMPAFIFEHV
QNLDFRALYPKFTDYDIRYYMYELLKAIDYSHSKGIMHRDVKPHNVMIDHEKRKLRLIDW
GLAEFYHAGTEYNVRVASRYFKGPELLVDFQLYDYSLDLWSYGAMFASMIFKKEPFFHGT
SNTDQLVKIARVLGTEKLWDYLEKYNIELGAEYDDIGTYPARPWSKFVNVDNEAYISQEA
IHLLDNLLRYDHQERLTAKEAMAHDYFKPVRVREEGEQE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG