YALI0D16423g

Overview

Description some similarities with uniprot|Q03362 Saccharomyces cerevisiae YDR476c hypothetical protein
Locus type CDS
Locus tag YALI0D16423g

Location

Species Yarrowia lipolytica Positions 2033710..2034847
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1138 (nuc.)
Previous locus YALI0D16401g Next locus YALI0D16445g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D16423g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D16423gYALI0D16423g_mRNA-001YALI0D16423g_CDS-001

Nucleotide sequence

 

>YALI0D16423g
ATGTCTTCCAACGATAAGAAAAAAGCCCCCAAGGCTCCCGCGCCTTCTTCCGCTGCCCAA
GCGGCCGCCCAGGCACCTGCTGCCGCGAAGCATGATGCCGCTGCCGCCGCCGAAAAGGTG
AAATCTGACGCTCTTAAGGCGGCCCATGTGGTGGGCGAAAAGGCGCAAGAGGCCAAGGAA
TCTGCCTCCAACACCATCAAGAATGCCACCAGCGGATCCGCCGGCGCAGGTGCTCCCTCT
GGACACTCTTCCGGAGCCTCTGTGCCTTCTGGAGCCGGGTTTACCTCCACTTCTGGCTCT
GTGACCAAACCGGACCTTAAGGCCAGCACTCACGCCCCCGCTGCGGAGGTGGATGCCGCG
ACCGCCCGAGACGAGGCCACCAAGGCCCGGATTCTCGCGCACATGAACCAGGACCACAAA
CTGTCGCTCAAGGACTACCTGTACCACTACGGCGGAGTGACGGCTACGGCACAGATTGCG
TCGGTGACTCTGGTGGACATTACCTCGTCGGCGCTGGTGCTCAACTACTCGCTGGAGTCG
GACCACCTCAATCTGCGAACCCTGTCGATCCCCATCAAGCCCGAGCTCGCCTCGCTGGCC
GACGCCCGAGAGGTGCTGGTCAACATGGCCAAGACCGCCGCTGGCGCTCGGGGTTACTCA
CCCTTCCAGATCAAGGAGTTCAAGTGGGTGTCGGGCCCGGATATTCTTGTCCCCGCGGCT
GTGCTCTGGACCGTTGTGGGCCTCGCAGACCCCAACCTCGTCTACAAGAACCCCAAGTCG
CCGTTTGTGATTCTCGTCAACCTGCTGCTTAAGGCCATTGGACCCCTGCTGCCGTTTGAC
CGAGACCTCATTCCCCAGATTGCCATCATGGCCATGGGCGAAATCAAGCGACGTCGAAAG
GACATTGTTAAGTGGACCGTCATCATCCACATTCTCGAGTCCTTCTTCTTCATGCGGCCC
ATTCTCAACAAGTACCGAGTCGCCAACCCCACAAAGCTCTACTGGTACATTGCCTGTATG
ATTGAGGGATTCCCTTCCCTTAAGAGAATCTCCAAGCTCGGCAAGTCTCTTGATAACCAG
TAAGCACTGAAGATGTATGAACTGTAATGAACAATGAACTGTATGACATGTAGGGGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D16423g_CDS-001

Protein length: 361 aa.
Product: Conserved hypothetical protein

>YALI0D16423g_CDS-001 MSSNDKKKAPKAPAPSSAAQAAAQAPAAAKHDAAAAAEKVKSDALKAAHVVGEKAQEAKE
SASNTIKNATSGSAGAGAPSGHSSGASVPSGAGFTSTSGSVTKPDLKASTHAPAAEVDAA
TARDEATKARILAHMNQDHKLSLKDYLYHYGGVTATAQIASVTLVDITSSALVLNYSLES
DHLNLRTLSIPIKPELASLADAREVLVNMAKTAAGARGYSPFQIKEFKWVSGPDILVPAA
VLWTVVGLADPNLVYKNPKSPFVILVNLLLKAIGPLLPFDRDLIPQIAIMAMGEIKRRRK
DIVKWTVIIHILESFFFMRPILNKYRVANPTKLYWYIACMIEGFPSLKRISKLGKSLDNQ
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG