YALI0D16445g

Overview

Description weakly similar to uniprot|O94461 Schizosaccharomyces pombe Putative phosphoglycerate mutase
Locus type CDS
Locus tag YALI0D16445g

Location

Species Yarrowia lipolytica Positions 2037618..2039394
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1777 (nuc.)
Previous locus YALI0D16423g Next locus YALI0D16467g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D16445g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D16445gYALI0D16445g_mRNA-001YALI0D16445g_CDS-001

Nucleotide sequence

 

>YALI0D16445g
ATGCCGCATTCGCTTCCGCCACTCCGTATCATTCTTGTTCGGCACGGTCAGACGGACCAC
AACAAGGCCGGCATCATTCAGGGCCAGACCGACATTCCTCTGAACGACGAGGGTAGAAGA
CAGGCCCGGGACTGCGGCAAGAAGATCAGAGAGGTGTTGGCCGGTTTCGGGGATTCCGTT
GGAGCCGACTTGGACTTTTCCGACTCGGTTGGGGATACTGACAGGAACAGTAACTCGAAC
AGATTGTCAACCCCTACCGCCGCCCCCACTACCGACTGGAATCCCAAAAACCCATTCAAC
GGCCCCATCTCGGCGGTGTACACGTCGGACCTCAAGCGGTGCGTCGAAACCACCGACATT
CTGCTGGCGACCGCCGGTATCGACACAAAGGCGGCGCGGACCCCGCTACTCCGAGAACGG
TACATGGGAGAGCTGGAAAACAAGCCCGCCGTGGAGGGCCGACAGCGGTGCCGAGACGAA
AACCGCCATTGGGACTCGTTTGGTGAGTCTAACACACACATGGTCGAGCGGCTCAGCAAG
CAGTGGGACACCATTGTGTCGCGGGGACTCGAGGAGCGGCAGGGGACCGTGCTGGTGGTG
ACGCATGGCGGCTGCATCACACGGTTCACGAACTATCTGGTGAACGAGCTGCAGCCCGAG
CCGTTTGCGCTCAGCTCGCTAATTTCGGTTGACTCACTGCGGTCTCCCCAGAATACCTCC
TTCACCGTGTTTGACATCGACAGAAACACGTTTCAGGGCACGTTACAGGTGTTTGCCGAT
ATCGCCCACCTGGATGGGGTTGAGAAGCGCGTCTCCAACCCCGATGAGTATGTTCCCGGA
AGGTGGTAGGCGTAGACCCGAGGTTCGCCCAAGTCGTGTCTGGTAATTGGGACACTAACT
GCGATATACCCGATTAATTGCCACCCCAGTTTTTCCAATTAGGTCACATACAGTTACACA
TAATAGACAATACATGTTTGTTGTTGGTTGGAGTGTGGGTTGAAATTGCTCTTGAGTTCA
GGAGCATTATTGGCGGGAACAATTGTGGGCTTAACTGTTTAGGGCGTGACGGCAGCAACC
TCTTCTGGGTTCGTGCTCTGGGGACCCCCGATCTCTATTGGGCTCCAGTTCAGAGAGAAG
CTCAGAATCCAGCTCAGAATCCAGATCCAGTACCGCCGAGAATCCATGTTGAAGTCTTTG
AGTGCACAAAACGGGCATTAAAACTTCTTAAATGCGACAGACTTGGCGAAAATGAGACAG
ATCTTGTTAGATGATCTATTCTGAATCAGACAGATCAGTCGAACTGTTAGCCGTCGAACT
GGGCTGGACTACAGTGAGTCGTCGCTAGGGCAGACTGGGGAGATACAGTGGGAAACGGGC
TAGATTTAGATGGATGTATGGTGGTGTCGGGACTCGGTGTTTCACTCAGATGTGTCTCAG
GCCTTCCACTCTTCACCTCCCTCTGTCGAACTGTGGCTTGCCAAGCTTGTGATGCGATTG
GTATCAGATAGCGAACTTTTACACAGAACAAAATGCTCAAATTGACCGTGTCGTCGACTT
GAGATCGTTTTCAGCTACAACTGGACTTGTTGATAAGACCTTGTTGGTGGAGACATCGAA
AGAGGGAGTACAAGTGTGGTGTCTTGTGCTCGTACAGTATGTAGGTATGTACTGTACGCA
TAGAATGGTGGTTCCCTGCTGCATTGGTCACGTGACGGCATTCACGACAACATTTGCTTT
TTGATTGATTTCCATGTGTTTTAATTTGTTTTTGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D16445g_CDS-001

Protein length: 283 aa.
Product: Conserved hypothetical protein

>YALI0D16445g_CDS-001 MPHSLPPLRIILVRHGQTDHNKAGIIQGQTDIPLNDEGRRQARDCGKKIREVLAGFGDSV
GADLDFSDSVGDTDRNSNSNRLSTPTAAPTTDWNPKNPFNGPISAVYTSDLKRCVETTDI
LLATAGIDTKAARTPLLRERYMGELENKPAVEGRQRCRDENRHWDSFGESNTHMVERLSK
QWDTIVSRGLEERQGTVLVVTHGGCITRFTNYLVNELQPEPFALSSLISVDSLRSPQNTS
FTVFDIDRNTFQGTLQVFADIAHLDGVEKRVSNPDEYVPGRW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG