YALI0D15620g

Overview

Description similar to uniprot|P78600 Candida albicans Prolyl- tRNA synthetase, cytoplasmic
Locus type CDS
Locus tag YALI0D15620g

Location

Species Yarrowia lipolytica Positions 1910615..1912030
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1416 (nuc.)
Previous locus YALI0D15598g Next locus YALI0D15642g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15620g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15620gYALI0D15620g_mRNA-001YALI0D15620g_CDS-001

Nucleotide sequence

 

>YALI0D15620g
ATGCTTCCCCGACTCTCTCGGTTGACAACGCGTCGACTCAAAGATGTGACTCCATCTACA
ACTGCATCTGATCTGCTTGCTGTGACTGGCTATGTGTCTTACCCATCTTCTGGCCTAGCC
AACTTACTTCCCCTTGGGCTCAGAGTACAACGAAAGATTGAGAATATCATTCGATCTGAG
CTCGATTCAATTGGATGTGCTGAGGTGTCGCTGTCCAACTTTTCGGATCCTGACCTGTGG
AGGAAAACAGGTCGTATCAATAACGGAGAACTGTTCCGGGTGAATGACGGCAGCGAAGAC
CCACCCATTATCGCCCCAACGCATGAAGAGGAAATCACAAATCTCATTGCGCAGAAAATT
TCCAGTCCTAAGGATCTGCCTATACTGTGGTACCAAATTGGAAAGAAATACCGCAACGAA
GCCCGGCCTCGTGGGGGCCTTCTGCGTGGAAAAGAATTCACCATGAAAGATCTTTACTCG
TTCGATGTGGATGAACCACGTGCACTTGAAAGCTACGATCTGGTGAGAAAAGCCTACGAT
CAGATTTTTGGAAAGTTAGGTGTGCCAGTGAAATCGGTGGCTGCTGACTCTGGTGCAATC
GGTGGATCTCATAGCCACGAGTACCATGTTATTGATGCATCTGGTGAGGACACTCTTGTC
ACATGCTCGTCTTGTGACTATTCAGCTAATATCGAGGTTGCTGAACGAGCTGCTGGTGAC
TCTGAGACCATTTGCACTGAAGTCAATGGCGTTCTTGTGACCCATGAGTCAAGTCATGCT
GTTAATCCCAGACTCGTTGATAGAGCCCTTTCTTCCTATGGACACGATGCATACAAAATT
TCAATGCTAAGAGATGGTGTGTCGCACAATCTAACGACCCCCAAGGAAGGTGATTCATGT
CCTAATTGCACCTCGTCATTGAAGTTTTCTAACGCCATTGAGGTTGGTCACACATTCTAC
CTTGGTACCAAATATTCTAAGTCTCTATCGTGTGACTTCAAGAACTCCGAGAATAAGCTT
ACCCCTGCATTCATGGGGTGCTACGGCATCGGAATTACTAGATTAGTGGCTGCTATTGCC
GAAGTGTCTCGTGACCAGCATGGTCTCAAATGGCCTTCCAATGTGGCCCCTTACGAAACT
GTGGTCATTCTAGGAGGTGGTGCGACTGAATCAACGCTTTTGGATAAAGCTTCTGAACTG
GGGGCTTTACTACAAGATGCTGTTATCGATGATCGGCCAAAAAGATCCATTGGGTGGAAA
ATCAACGAGGCGAAACTCATGGGTTTTCCTCAGGTTGTGGTAGTAAAGAAGGACGGAATC
GAAGTTATCCACAGATAGCCTCGTATCAGTGACTCGTCATTCTGGTAGCATTCCTCATAC
TGTAAATAAATACGAACTCACCTATCATGACCACGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15620g_CDS-001

Protein length: 446 aa.
Product: Prolyl-tRNA synthetase, putative

>YALI0D15620g_CDS-001 MLPRLSRLTTRRLKDVTPSTTASDLLAVTGYVSYPSSGLANLLPLGLRVQRKIENIIRSE
LDSIGCAEVSLSNFSDPDLWRKTGRINNGELFRVNDGSEDPPIIAPTHEEEITNLIAQKI
SSPKDLPILWYQIGKKYRNEARPRGGLLRGKEFTMKDLYSFDVDEPRALESYDLVRKAYD
QIFGKLGVPVKSVAADSGAIGGSHSHEYHVIDASGEDTLVTCSSCDYSANIEVAERAAGD
SETICTEVNGVLVTHESSHAVNPRLVDRALSSYGHDAYKISMLRDGVSHNLTTPKEGDSC
PNCTSSLKFSNAIEVGHTFYLGTKYSKSLSCDFKNSENKLTPAFMGCYGIGITRLVAAIA
EVSRDQHGLKWPSNVAPYETVVILGGGATESTLLDKASELGALLQDAVIDDRPKRSIGWK
INEAKLMGFPQVVVVKKDGIEVIHR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG