YALI0D15598g - NTH1

Overview

Description uniprot|Q6C8Z4 Yarrowia lipolytica YALI0D15598g NTH1 Neutral trehalase
Locus type CDS
Gene name NTH1
Locus tag YALI0D15598g

Location

Species Yarrowia lipolytica Positions 1908394..1910370
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1977 (nuc.)
Previous locus YALI0D15576g Next locus YALI0D15620g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15598g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15598gYALI0D15598g_mRNA-001YALI0D15598g_CDS-001

Nucleotide sequence

 

>YALI0D15598g
ATGACACGATCAAGAAGTTATAGCCTGCCAACACCACCTCAACCCAGAACACCAAGACGG
TTCAGTGCCAGCAGTCTCATACTGGGTGGTGAGAAAAGGTTCATAGCAAGTGATCATACA
GTCGAGCAACTGCTGCTTCTCTGTGACGACGAAGGACATATCACGATCGACACCACCACG
ACTTCTTCTGACAATTTTCTACAGGTGGAGACAGATGCTGGGTGGTGCTACCAGGTCATA
GGCGCCTACCAGTTAGCTACTGTACTCAATTATCTCCTCCTTAAACGAGGGGGTCCTGAA
ACTGGGTTGAAAAGGCTGAAACAAAACCAGAAGACAATTGCTCCGAGTTCTTGCGTGACA
CATATCTCAAGCGACAAAATTTTGGAACCCCCACACCAGAGACTTAAAAACCTTGTGGAC
AATCAATTTTGGCACCAATTGACCAGGTCTATGGATACCAAGACGATCTATTCTCTATTG
GGGGATTCAAAAGTGCAGGGTGAAGGAGTTTTGTATTTACCACATGCTAGTGAGCAACGC
CAATACTATGCAAGCCTGGATGTAAATTTACAAGATCTACCCAAGAGAATCTCACCTGAA
TATGTCCTCAGCATCAATTCTAGTCCTGGTGTGCTAGCACTTGCTATGGACAAAAGCCAC
AATCCTTTGCCTTACATCGTTCCAGGAGGTCGTTTCAACGAAATGTATGGCTGGGATAGC
TATTTCGAGCTCTTGGGTCTTCTCGAAAGCGGGGGGCCTGGGTATATTCACATCGCCGAG
TCAATGTGCTTGCATTTTTGCTACCAGATCAAGAATTATGGCAAGATACTGAATGCCAAC
AGAAGTTACTATCTCAGCAGATCGCAGCCTCCATTTCTTACAGACATGGGCCTGAGAGTC
TACTGTCGTACTCGCAACAAGGAGTTTCTGAAAGAAATCTATAACTCTGCAGTCACAGAA
TACAACACAGTATGGATGGGAAACCCGAGACTGGACAGACGTACTGGACTATCGAAGTAT
TGCCCAGCAGGGTTAGGTATTCCACCTGAAGTGGAGACAGGGCACTTCGACGGAGTCCTT
GGACCGTACGCGCAGAAGTATGGGCTTACTTTGGATGAATTTGTTCAAGCATACAACTCT
GGTAACATCGTTCAGCCAGAACTAGATGAGTACTTTTTGCATGATCGAGCAATTAGAGAG
TCTGGTCACGATACCTCTTACAGATTAGAAGGCGTCTGTGCTGACCTCGCTACTGTTGAC
CTGAACTCATTGCTATACAAGTATGAAGTTGACCTTGAGTACATTGAGCGGGAGCTGAAT
CTCAGCCCATGCGGATTCTATGAAGCTGCAGAGAGACGAAAGGAAGCATTCACGCAATTC
TTGTGGAACTCCGAAGACTCATGTTTTTACGACTACAATTGCAAGACCAACGCTCAAAGG
AAGTACACCTCGAGCACGGGTCTGTGGCCACTGTGGTCGGGAATTGCCACTCGCGAACAA
GCGAGGGGGATCGTGTCTACTATAGCGTCCCTCGAAGAATATGGCGGCCTGGCATCCGGC
TCTAAGGCATCATTGGATGAGTTTTCTGGAGGATCAGGGGTTCCTAGACAATGGGACTAC
CCTAATGGATGGGCCCCACACCAGGTTTTGGCATGGCAGGGACTGCAAAACTATGGATAC
GATAACGTGGCAACTAGACTCGCATTCAAATGGTGTGCTATGATGGTTCATTCATTCAGA
GACTACTCCGGGTTGGTGGTGGAGAAATACAACGTTACCGATCCTACCAAACCCCATGTT
GTCACAGCTGAGTATGGAAATCAGGGATCCGTAGCCTCAGGCTTTGGATGGGTCAATGCT
TCCTACGTAGTGGGACTAGGGTACCTGAGCAATCAGCAACGACAACGATTAGAGTGGGGT
GTGTGGAAGAGACACGAAAAGCTGTAAAAAAGTACGACCAATTTATTATACGAACAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15598g_CDS-001

Protein length: 649 aa.
Product: Neutral trehalase
Gene: NTH1

>YALI0D15598g_CDS-001 MTRSRSYSLPTPPQPRTPRRFSASSLILGGEKRFIASDHTVEQLLLLCDDEGHITIDTTT
TSSDNFLQVETDAGWCYQVIGAYQLATVLNYLLLKRGGPETGLKRLKQNQKTIAPSSCVT
HISSDKILEPPHQRLKNLVDNQFWHQLTRSMDTKTIYSLLGDSKVQGEGVLYLPHASEQR
QYYASLDVNLQDLPKRISPEYVLSINSSPGVLALAMDKSHNPLPYIVPGGRFNEMYGWDS
YFELLGLLESGGPGYIHIAESMCLHFCYQIKNYGKILNANRSYYLSRSQPPFLTDMGLRV
YCRTRNKEFLKEIYNSAVTEYNTVWMGNPRLDRRTGLSKYCPAGLGIPPEVETGHFDGVL
GPYAQKYGLTLDEFVQAYNSGNIVQPELDEYFLHDRAIRESGHDTSYRLEGVCADLATVD
LNSLLYKYEVDLEYIERELNLSPCGFYEAAERRKEAFTQFLWNSEDSCFYDYNCKTNAQR
KYTSSTGLWPLWSGIATREQARGIVSTIASLEEYGGLASGSKASLDEFSGGSGVPRQWDY
PNGWAPHQVLAWQGLQNYGYDNVATRLAFKWCAMMVHSFRDYSGLVVEKYNVTDPTKPHV
VTAEYGNQGSVASGFGWVNASYVVGLGYLSNQQRQRLEWGVWKRHEKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG