YALI0D15642g

Overview

Description similar to uniprot|Q12496 Saccharomyces cerevisiae YOL098c
Locus type CDS
Locus tag YALI0D15642g

Location

Species Yarrowia lipolytica Positions 1912939..1915998
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 3060 (nuc.)
Previous locus YALI0D15620g Next locus YALI0D15664g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15642g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15642gYALI0D15642g_mRNA-001YALI0D15642g_CDS-001

Nucleotide sequence

 

>YALI0D15642g
ATGTTCACCAAAGTGGAATCGTTCGAACGGGAGTGGACAGGTCAACCTGTGACCCGCTAT
GTGTCCTCTATTTCTGGCATGAGTGTGGTGTTGGTGGACTTCCCTGGTCCTATCATTAAC
GCTTACTTAGCTGTTGCCACGGAGGTCCATAACGACTCGGGTACCCCTCATACATTAGAA
CATCTGTGTTTCATGGGTAGCCAGCAATTCCCATACAAGGGTCTTTTAGACCAACTTGCG
AACAAGATCTACGGCACCACTAACGCATGGACTGACACTGATCAGACGGTTTACACCCTC
GCAAAGGCTGGTGATGCCCAGTTTGCCAAGTTCATGGCGGTTTATCTTGACCATGTGATC
AACCCGACCCTGAGAGACTCGTCCCATCTCACCGAAGTTTACCACGTTACTCCTAAAGCC
CGTGAAGCTGGCGTGGTTTTCTCAGAGATGCAGGCTCATGCCCACTCTGCTGACTCGCTA
ATGGAGAACGTGACACAGAAGAAGTGTTTTCCTGAAAGCTCTGCTTATAGATCAGAGACT
GGTGGCATGCTCGACCCCCTACGTGTGCTCACTAATGAATCCATCAAAGCTTTCCACAAG
TCTATGTATGCCCCTGACAACATGGTTCTTGTCATCGCTGGTCAGATCGACGAAAATGCT
TTGTTTCGTGAACTGTATAAGTTTGAGAAAGAGTGCTTTCCTGGTACTCATCGAACCTTT
CGGCCATTCGTGGACACAGAACCGGATATCATGATCCCGAAATCTGAGACTGTTACCGTG
GACTTTCCTGATGAAGACGAGGAGTTTGGCAAGGTTCAGGTGACTTGGATTGGTCCTGAT
CACGATGATGGCCTCGCCAACACTGCATTGGACGTACTGGGTGCCTATCTTACTGAATCC
GGAGCAGCCCTTTTGCAGAAAGAGCTGGTAGACATCCCTGACCCCCTCGCTGTCTCCGTC
ATGTTCTATACGCGTGACTACTTGAAGGTTAGTTTCAGTCTGGAACTTGAATCAGTTCCT
ACGAAGAGACTCACTGAGGTCTCTAAGAAGATGCTGAACCTCATCAAAAACCACATTGTC
GACCTGAGCCGTGTGCAGGATTGCCTTGAGAACACGAAGCTGACACTTCTGAAGCGATCC
GAAGAGAACTCTGAATTCTTATGCACAACCGTCATTGAGCATTTCCTTTACGGTCGTGGC
TCTCTTGAGGATGATTTCAAGATTAAGGATCATCTTGAGACTCTCGCTACTTGGACCACA
GCGCAATGGACTGAAACCATGGTTCGTCTGTTTGCCTCCAACAATATCACTGTATTGGGT
AAGCCCAGTGCCAAACTTGCTGCTTCTATTCCCAAAGAAGCCAAGCAGCATAAAAAACAG
CTTCTTCAGAAATTTGGCAAAGAGGGTCTTGAACGACAACAGAAGCTCTTGGATGATGCT
GAAAGGGAACAAAGCAAGCCTATCCCTTTGGAAGTCATCGAAGAGTTCAAGATCAGCGAC
CCTAAGATTGCCTTTCTAAAGTCTCAAACTGAGCGGTACGGGCGATGGGCCGGGGAAGAG
GAAGCACTCAGTATCCATTATGAGAAGTTCGACAGCAACTTTGTGAACATTGATATCTGC
CTGGGTGCTCAGAACATCGACGAGGAGCTGCTACCTCTGATTCACCTGATCTATGGCTCA
GAGATCTTCAACTTCCCTGTTGAGGGTCTAACAGCTGAAGAGGTGATGACAGGATTGAAC
CACGACACAATCCAGTACTACGCGTATGCCAGTTATAAGGGCTTCAACGAGGTTGTGCAG
GTACATGTTGAGGCTGAGTCAAGCAAGTACGAGAAGGTTGTACAGTGGATGCAGAAGTGC
CTGCTTGAGACTGTCTGGGACATAGACCGAATTCAAGTCTGTATTGATAAGGCGCTCAAC
CAGCTGGCCGAAACTAAGCGCGACGCTGAGTCTCGACTGACCTCCGCAAAGCAGCGTTAT
CTTTTCAAGAACTCTCTCGTACATGCTGAAAACCTGGCTTCTTACGAACAGTGGCTCCGG
TCTGTCGACATCAATACCGTAATCAGCCAGCTTGAAAAACTAAAGAAACAGTGGTTCAAG
AAGGACATTTTTGTCTCTGTGACTGGTAAGGTCAAGGGGGATAATGTGAGTGCCCCTTGG
AAACAATTCTTTGCCACATTGCAAGATACCCCGTCAAAGTTGGCGCTACCTCGGTCCTAT
CAACATCTGTCAACGCTGGGAGAGAATCTCAATGCTGAATCAATTCTGATTCCCATGAGC
AGCACCAAAACTGCACATTTGAACCTCATGGGACATCTTGACATGACATATACGTCTTCT
GATCACATCGCATTACTCGTTGCCTGTGAATACTTCCAGTGTGTGGAGGGTCCGTTCTGG
ACGGGACTGAGAGGTAAGGGCTATGTCTACGGCGCTTCTCTTGGGCCCTACATCGAATCC
AAACGCCTTCAGTTCGAAATCTATCGTTCCAGTAACGTATACACTGCACTTTGCGAAGCC
AGGTCTATTGTCAACAGCACAACCACTTTGGATGACACTTTATTTGTTGGTGCGAAGCGA
TCCGTCATCAACAACTATGCCAATTCTCGGGCCTCAAACGCTGCTGCTGCATCCAGCAAG
GTTGTGGATGTAGAGATCAAATTCCGAAGTGAATGGACAACTGTGGATGATATGCCCAAC
TTTGTCGACCAGTTCGTCAAGGATGTTGAGGCAGTGACAGAGGCAGAAGCAAAGCGCGTT
ATCCAAAAATATGTTGTTCCTCTTTTCCAGGGTGCGCAAAACACCACGGTGTTTTGCGCT
CTCAACATCGGCGAGGTTGACAACCTTAAGGAGAAGCTGGAGAAGGAAGGCTATATGGTC
GAAGTTGAAGAAATCGATGAGGGTGAGTGTGTCAGCGACGAGGGAAGTGAGACTGATAGA
GATGACGACGACGGGTCTGAAGATGACGATGACGAATCTGATGGAGATACTGATGATACG
TCCTCAAGCGATGATGAATAACTAGACGATACAGTAATAATAGACACTGATACATTCGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15642g_CDS-001

Protein length: 1007 aa.
Product: Metalloprotease, putative

>YALI0D15642g_CDS-001 MFTKVESFEREWTGQPVTRYVSSISGMSVVLVDFPGPIINAYLAVATEVHNDSGTPHTLE
HLCFMGSQQFPYKGLLDQLANKIYGTTNAWTDTDQTVYTLAKAGDAQFAKFMAVYLDHVI
NPTLRDSSHLTEVYHVTPKAREAGVVFSEMQAHAHSADSLMENVTQKKCFPESSAYRSET
GGMLDPLRVLTNESIKAFHKSMYAPDNMVLVIAGQIDENALFRELYKFEKECFPGTHRTF
RPFVDTEPDIMIPKSETVTVDFPDEDEEFGKVQVTWIGPDHDDGLANTALDVLGAYLTES
GAALLQKELVDIPDPLAVSVMFYTRDYLKVSFSLELESVPTKRLTEVSKKMLNLIKNHIV
DLSRVQDCLENTKLTLLKRSEENSEFLCTTVIEHFLYGRGSLEDDFKIKDHLETLATWTT
AQWTETMVRLFASNNITVLGKPSAKLAASIPKEAKQHKKQLLQKFGKEGLERQQKLLDDA
EREQSKPIPLEVIEEFKISDPKIAFLKSQTERYGRWAGEEEALSIHYEKFDSNFVNIDIC
LGAQNIDEELLPLIHLIYGSEIFNFPVEGLTAEEVMTGLNHDTIQYYAYASYKGFNEVVQ
VHVEAESSKYEKVVQWMQKCLLETVWDIDRIQVCIDKALNQLAETKRDAESRLTSAKQRY
LFKNSLVHAENLASYEQWLRSVDINTVISQLEKLKKQWFKKDIFVSVTGKVKGDNVSAPW
KQFFATLQDTPSKLALPRSYQHLSTLGENLNAESILIPMSSTKTAHLNLMGHLDMTYTSS
DHIALLVACEYFQCVEGPFWTGLRGKGYVYGASLGPYIESKRLQFEIYRSSNVYTALCEA
RSIVNSTTTLDDTLFVGAKRSVINNYANSRASNAAAASSKVVDVEIKFRSEWTTVDDMPN
FVDQFVKDVEAVTEAEAKRVIQKYVVPLFQGAQNTTVFCALNIGEVDNLKEKLEKEGYMV
EVEEIDEGECVSDEGSETDRDDDDGSEDDDDESDGDTDDTSSSDDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG