YALI0D15334g

Overview

Description some similarities with uniprot|Q9UUD1 Schizosaccharomyces pombe Putative DNA-binding protein
Locus type CDS
Locus tag YALI0D15334g

Location

Species Yarrowia lipolytica Positions 1869597..1872241
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2645 (nuc.)
Previous locus YALI0D15312g Next locus YALI0D15356g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15334g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15334gYALI0D15334g_mRNA-001YALI0D15334g_CDS-001

Nucleotide sequence

 

>YALI0D15334g
ATGGACAACTCTATGAAATTCGAGTTTGTCGACTGCGACAATTTACTCGACACGTTTGCG
CCGCCCAGACAGGACTACATGGATTTCCGGCAGCCAGAAGACCTGTCGTTTCTGGACTAC
CCGGAGCAGCCCGTGTACATGAACGACATGGACTATGGGGTGAACAACATGGGCCTGAAC
CCCATGGCATTGGGAAACACCAATTCGAACGGCGTGCTGCAACCCCAGCAGCTGCAACAG
AGCCAGCAGCAGCACCACTTTCAGCACGGACAGAACATGCTGACTCCTCCCTACCTGTCA
GCCTCGGCTTCCGACAACTCTCCCGAGAGCGTTGGCAGCAGTGGACGGTCGCCTGCGTCC
GACGCGTCTTCTCCCGAAATGGCCACGTCATCCACTTCACCCGTAGCACGCGGTGCACGA
GTGGCTTCTTCTGCACCCGGCAAAGTCATGAAGCCCAAGAAGGGCCGGTCCTCGCACAAC
ATGATCGAAAAGAAGTACAGAACCAACATTAATGACAAGATTAGCGCGCTGCGAGACTGC
GTCCCCGCGCTGCGATGTGCTCTCAAGGGCACCAAGGACGACGAGGAACTGGACGGCCTC
ACCCCAGCCTCCAAGCTCAATAAGGCCACTGTGCTGAGCAAAGCCACCGAGTACATCAAG
CATCTCAAAACGAAAAACGATGAGATGCAGGCTGAACTGGACGAGCTACGACGAATGATG
GGCAAGGGTTCTCCCGGATCTCGAGGTGGCTCCCCCACTAACATGCTGCAGCAGCCCGCA
GTTTTCTACGACGAGACACAAAACCAGCAGCAGCAACAGCAGATGCGACAGCGACCCATG
GCACAACAACAGCAACCTCATATGCAGCACCACATGAACCCCGCACAGCCCCACATCCAG
CAGCAGCCCCCGCAAAGCCGCTCAAACAAGGCCATGCTGGGTCTCATGACCGGTGTCATG
GCCACGGGCCTCATGTCCGATTACGGCGGAGACTCGCGAGAGCTGTCCTTCATTCCTATT
CCCCTTCTGCGATATGTCCCCGCTGAGTCTGTCAAGCACGGTCTGGTTCTCCTCAAGCTG
ACTATGGTCATCGGAGCCGCCATGCTCCTGCTGCTGCCTCTGCTGCACTCGCCTGCACCC
CCACCTCACCACAAGCAGATTGAGGCCACTTCCGTCGAGCAGTACCGACGACAGTCGTGG
CTGGTCAACTCTCACTTTGTTGCCACTCCTCAGTCCTCCGCCGCCTACGTGGTTGAGATT
GCCAAGGCCATGGGTAAGGCATTGTTGCGATTCCTGATCGGCGACGGCTACCTGCTACTT
CAGTCCTCCTCGTACCACCTGCCCATTTCTCGAGCCGTCGAGGCTCAGCTGTGCGGTGGC
CAGGAGAACATGTCGCGAGCCGACCTGTTTGTGACCTACCTGCAGACCCTGACTCTTCCC
CCCACCCCTGCTCTTTGTGCCACCCAGGCCATCCATGTTCATGTTCTTGCCAACGGTCTC
CCCTGGCTCAAGAAGGCTTCTGTGATCATGGCCGACCGACACTGGAAGCAGGCCCGAAAG
CTAGCCTCCCAGAAGAAGCACGCTGTGCCCTCCTACCTGTCGCTGCTGCTTGCCCAGAAT
GACGTTTTCGACTCTGACATTATTCAGCGGTTCTACAACTTTGCCCACGGTCTGGATGCC
TCTCACGGCTGCTCTCTAGGTATGTTGGACGAAGGATTCATCACCGCCACCTCCGATTCT
GCTCTTAAAACACCTCTTGACGTGCTCGCTGCGTGGTACTCCACCCGAACTCTCCGGGAG
GTGATTCTGTTCCAGCTCGAAGCCAACGAGGTGGACTACAACAAGCTGGACACCGCTCAG
GCCGTCTCTCCCGTCAACAGCATTGCTAAGCGACGAGCTGCCATTGCCCACTCTGTTGTT
CTTGGCCGAAAGGACTCCAACCTGGTCAAGGATGCTCTCGTGATGGTCAAGGCCGAGCTT
GGTGAGATTGTCATGCCTCCCATGCCCGTCGAGTCTATCGACACCGTTGAGGAGGCTGTC
GAGGAGGAGGAGCCGGGGGAGGAAACTGAGGACGACGAGGCTGTTGTAGAGGACTCCGAG
TCTGAATTTTCCGATGACGGCTCCGTATCCGTCGCCTCCACTATCTCCGATACTCCTGTT
TCTTACACCTCGTCCAACCCTACGGACTCTCCCGTGGCCCGAGACTCACAGATTGCCATC
CACTGCGCTTTCATCCTATACTACCTGTCCGAGGGTGAGACCGATGGCGCCACCAAGCTG
CTTCAGAAGCTGCGAATCCGATCTGTGGATGAGTTTGGACTGCTGTCCTTCTTTTCCGTG
TGGACTCTGTTTTCCCAGCTTCAGGAGCGACCTGCCCACCGAACGACCGCTATTGAGCGA
CGACTCGAGGAGCTGGTTGCTTCTGTGCGAATCTGGCTCGGCAGCGAAAAGGCCGAGCTC
GAGGGCATTTCACTGCATCGACGACGATCTCTTGTTAACAAGTGTGTCAAGATGGGCATG
GAGTTTGGCGGGTTTGAGGACGATGAGGGATACCAGTCTCAGTAAGTAGCTGAGGCTCGA
ATGGGGTATTTATAGAGGTATTTATTGTGTAAATAGTAATCGATAATTGCAATCAACTGG
ACTCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15334g_CDS-001

Protein length: 855 aa.
Product: Conserved hypothetical protein

>YALI0D15334g_CDS-001 MDNSMKFEFVDCDNLLDTFAPPRQDYMDFRQPEDLSFLDYPEQPVYMNDMDYGVNNMGLN
PMALGNTNSNGVLQPQQLQQSQQQHHFQHGQNMLTPPYLSASASDNSPESVGSSGRSPAS
DASSPEMATSSTSPVARGARVASSAPGKVMKPKKGRSSHNMIEKKYRTNINDKISALRDC
VPALRCALKGTKDDEELDGLTPASKLNKATVLSKATEYIKHLKTKNDEMQAELDELRRMM
GKGSPGSRGGSPTNMLQQPAVFYDETQNQQQQQQMRQRPMAQQQQPHMQHHMNPAQPHIQ
QQPPQSRSNKAMLGLMTGVMATGLMSDYGGDSRELSFIPIPLLRYVPAESVKHGLVLLKL
TMVIGAAMLLLLPLLHSPAPPPHHKQIEATSVEQYRRQSWLVNSHFVATPQSSAAYVVEI
AKAMGKALLRFLIGDGYLLLQSSSYHLPISRAVEAQLCGGQENMSRADLFVTYLQTLTLP
PTPALCATQAIHVHVLANGLPWLKKASVIMADRHWKQARKLASQKKHAVPSYLSLLLAQN
DVFDSDIIQRFYNFAHGLDASHGCSLGMLDEGFITATSDSALKTPLDVLAAWYSTRTLRE
VILFQLEANEVDYNKLDTAQAVSPVNSIAKRRAAIAHSVVLGRKDSNLVKDALVMVKAEL
GEIVMPPMPVESIDTVEEAVEEEEPGEETEDDEAVVEDSESEFSDDGSVSVASTISDTPV
SYTSSNPTDSPVARDSQIAIHCAFILYYLSEGETDGATKLLQKLRIRSVDEFGLLSFFSV
WTLFSQLQERPAHRTTAIERRLEELVASVRIWLGSEKAELEGISLHRRRSLVNKCVKMGM
EFGGFEDDEGYQSQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG