YALI0D15312g

Overview

Description highly similar to uniprot|O74196 Colletotrichum gloeosporioides Ubiquitin-conjugating enzyme E2-16 kDa (Ubiquitin- protein ligase)
Locus type CDS
Locus tag YALI0D15312g

Location

Species Yarrowia lipolytica Positions 1866337..1867779
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1443 (nuc.)
Previous locus YALI0D15304g Next locus YALI0D15334g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15312g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15312gYALI0D15312g_mRNA-001YALI0D15312g_CDS-001

Nucleotide sequence

 

>YALI0D15312g
ATGGCTTTGAAGCGAATCAACAAGGAACTCAGTGATCTTGGACGGTGAGTATCAGTATTT
CGGACGTTTGGTTATTTTAGCCGCTGTTTTCGGGTCGTTTTTGTGGCACATTTCGACGTG
ACACAGACTTGTCCACCCAAATTCCAAAGGTTGGAGCGACGAGAAGGGCAAAAAGGATGC
TTAGATATGGATATGAGGCTGGAAAGAGTCGCAACTGTAGTGTTGATGCTAGGACATTCT
GGCGACACACGATATGTTTCTGTCGAACGATGGATGCACTTTTGTCGTTGTACAGTGAAG
TGGCGAATCGTGGGGTGACAAAGGGGATGTTGAGTGGGAACTAGTACTCAGAAACAACGG
ACAGGGTCGATAGACAACCCGTTTGCTAGTGTAGTTCACACTTAACTACTCTAGTTGCCA
GGAAAGCCGTTGCCGTTTGTTTATCACATAACGGGAGTTCTCATGAAACCATGGTAGGCT
CTGGTAAGGAGTGACTTGTGGATCAAGGATATCAAATCAGTTCACACATCGATGGACTAG
CGATCGAACTTTCTCATCAACGATCAGTTGGTGATCAAGTTGGTTATGCGAGTTGACGAC
TGATATGATTTTGCTGATCCGTTTGATCTGCGCTGATATACTCCACACGCAGCCAGGCCG
ATAATCCAAGTCGGAACTGTGATCGATAACATGGGAACACTGAAGCTCGGGCATAGCATA
TCGATGCTATTTTTCACCCGCTGCTTTCGTTGGCTCCCATTCTTGTGTCATCCTACTGCC
TCTCTTTCCCCTCTTCCTCAGGGCACCTAGCTCTCTCAGCTAGTGCATCTAATAAGTACT
GATAAACAGGGCTGTTCACCTTCTCCTGTTGCTATTGAGCCCTCATGCAATCGTCCTTTC
TTTCCTTACCAGTGTTCCTTACTAACTCAGTGATCCCCCCTCCTCTTGCTCTGCTGGTCC
TGTTGGCCAGGATCTGTTCCACTGGCAGGCTACTATCATGGGCCCCTCAGACTCTCCTTA
CTCCGGAGGTGTTTTCTTTCTGTCTATCCACTTCCCCACTGACTACCCCTTCAAGCCACC
AAAGGTGACCTTCACTACCCGAATCTACCACCCCAACGTCAACACCAACGGATCCATCTG
TCTGGATATTCTCAAGGAGAACTGGTCTCCCGCACTCACCATCTCCAAGGTGCTGCTGTC
CATCTGCTCCATGCTCACAGACCCCAACCCTGACGATCCTCTCGTGCCCGACATTGGCCA
CCTGTACAAGAACGACCGAGCACGATACGACGCCACTGCCAAGGAGTGGACCAAGAAGTA
TGCCGTCTAGGATGTATATAGGGAGCAGGCATGAGCCTATGCAAGCGAATGGCTGTGACG
ATACAACTAGCCAATGTTAGATTTATGGATGGTAAAACAATGTGTGTCGAGGACGCGTGT
TTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15312g_CDS-001

Protein length: 148 aa.
Product: Ubiquitin-conjugating enzyme E2-16 kDa (Ubiquitin- protein ligase), putative

>YALI0D15312g_CDS-001 MALKRINKELSDLGRDPPSSCSAGPVGQDLFHWQATIMGPSDSPYSGGVFFLSIHFPTDY
PFKPPKVTFTTRIYHPNVNTNGSICLDILKENWSPALTISKVLLSICSMLTDPNPDDPLV
PDIGHLYKNDRARYDATAKEWTKKYAV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG