YALI0D15356g

Overview

Description similar to uniprot|Q12176 Saccharomyces cerevisiae YDR060w MAK21 protein required for 60S ribosomal subunit biogenesis
Locus type CDS
Locus tag YALI0D15356g

Location

Species Yarrowia lipolytica Positions 1876550..1879890
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 3341 (nuc.)
Previous locus YALI0D15334g Next locus YALI0D15367r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15356g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15356gYALI0D15356g_mRNA-001YALI0D15356g_CDS-001

Nucleotide sequence

 

>YALI0D15356g
ATGTCACTGGAAACATCGTCGTTTTCCAATTTGGCCGACAAAATCAAGGCCAAGTTGGAC
ACGGCCAACGATAAAAACTCCAAGAAAAAGGACGCCAAGAATGCCGTCAAGGCTGAGAAC
AAGGCTAAGAACGATGCCCGAGAGGCCAAGAAGAAGGAGCATGAGCAGCGCAAGAAGGAG
GAGGCTGAAGCCATGAAGAAGAAGGCCAAGAACTTCAACAAATCCAAGTTCGGCAAGAAG
GAGGAAGAGAAGGTCACTGAGGTAAAGCCCTCGAAGACCAAGGGATCTGACAAGACCGAG
AAGAGTAAGGGGTCCAGGACCAAGAGCCAGGACTCCAGCTCGGACAAGTCGACCAAGACC
AAGACCAAGACCAAGGAATTCAAGCCTGATTCTCTGCTGGCCGAGATCCTGGAGCTCGGA
GGAACCGAAGAGGATCTCAAACTCGTGGAGGACCTGTCTGATGGAGAGGATGATGTGGTT
GTGAACCCTTCAAACGGCTCCAAGATTGATTCTGGAGATCTGCTCAAGTTCATGAAGGAC
ATTGGACTCGATGGAGACGTTCCTCAACTCGTCGAGGATGTCAAGGATGAGGACGTTGAG
GAGGAACAAGAGGAGGACGATGATGAGGGGATGGAGGATGACGAGGATGAGGACACAGAG
GAGGACGATGAAGAATCCGAGTCTGACTCTGACGACGAGCCTGCTCCCGCTAAGCCTATC
ATTTCTACTGGCCCTTCTGCCAAGGAGAAGCTTGTTGAGGCCATGTCTCTCCCCCAGGAC
ATCAAGACTCCCACTGCCGTGCCTCCTCGTCCTGATTGGTACAACCATCAGATTGACGTG
CCTGAGACCCTCGAACCCATTTCAGAGACTGACGTCGAGTCATTGAAGGATCAGGGTATG
AAGCTGCTCAAGCAGGATCAAGACACATACAAGGGCAACCAGCAATCGTCGCAACAAACG
TTCATGCAGCAGATGCTCACTTCCGGTACTCTGAGTGATAAGATTTCCACTTACACCCTG
CTTATCCACGACTCTCCTCTGCACAACCTCAAGTCGTTCGAACAGCTCATGTACCTTTGT
AAGAAGAAGGGCAGAACCTCTGCTCTCCAGGGTCTGGAGGCTCTGAAGGACCTGTTTATC
AACGCTGGTGTTCTTCCTGATCGAAAACTAAGATGGTTCAAGAACCAGCCTGTCCAGAAA
AACTCGGCACCTGAGTACCTCGCCATCTGGGCTTTTGAAGACTGGCTCAAGACCCAGTAC
TTTGAGCTGCTTCAGATCATGGAGGGAATTTCGCACGACACTGTCACCCATCTGCGGTCT
TCGGTGGTAGCCCACATTGTCGACCTTCTCAAGGCCAAGCCTGAGCAGGAAGTCAACTTG
CTCCGACTGGCTGTCAACAAGCTGGGTGACAAGGATACCGTTGTCTGCTCTCAGACGTCA
TACCACCTGCTTCAGCTCATGCAGGCCCACCCTGCCATGAAGGGTATTGTAATCAACTCC
ATCTGGGAGCTTGTTTTCCGACCCGGCTCTGACTACCATTCCCAGTACTACTCTGCCATC
ACCCTCAACCAGAGTATTCTTACATCAAGGGACACTGATCTGGCCAACACTCTTGTCACC
AACTACTTTCTGTTGTTTGAGAAGGTGCTAAAGGAGAACGAGGCCGATTTCGACAAGGAT
CTCACAAAGAAGGACGCCAAGGATACCAAGGGCAAGCATAAGTCGCGTCACAACGCCGGC
AAGGGTAAGAAGGGAGGTGTCAAGCAGCAGCAGAAGACTGTCGAGACACAGAAGGACGAA
GCTAACCAGAAACTCATCTCTGCTATTCTCTCTGGCCTGAACCGAGCGTTCCCCTTTTCT
AATCTGACAGAGGCTGAGTTTTCTAAGCACATTGACTCCCTTTTCAGAATTACTCACTCT
GCCAACTTCGGTACAGCCATCCAGGCTCTGTCTCTCTTGTTCCAAGTGTGCCAGGACGCT
CAAAAGGATCGATATTACCGAACTCTCTACGAGTCCCTCCTTGATCCCCGTCTTGTTGAT
TCTTCCAAGCAGGGACTATACCTCAACCTGCTGTTCAAAAGTATCAAGGCTGACACCAAC
GTTCAGCGAGTCCAGGCCTTTGCTAAGCGAATGGTGCAAGTTGCTCTTGGATGGCTCAAG
ACTGGCTCAGTAGTCGGTATGGTTTACCTTCTGGGAGAAGTGAGAAAGATCTCTGGCGGT
GTGGAGGCCCTCTCCAACGTTTCTACCGGCCTCGAGGAGTTTACAGATGTCAAGGAGGAG
GAAGATGATGGACTCATGGTCAACATTGATACCTCTAAAAAGTCGGTGGATAGCGGCGAG
TCTCAGACCCACAAGGAGGACTCTTACGATGGAAAGAAGCGTGACCCCTTGTTCGCAAAC
GCTAACACCACCTCTCTCTACGAGCTTCAGTTCCTTCTGAGACACTACCACCCTTCGGTG
ACTGCCTACGCCGAAAACTACGTCAACAGAGGCGAGTCTCTGGCCAAGCCCGATCTTGAT
CTGCATTCTCTGGCCCACTTCCTCGACAAGTTCGTCTACCGAAACCCCAAGCAGCAGCAG
AAGCTCAAGGGTAACTCTATCATGCAGCCTCTGGCTGGTGGAGCTGCTGCCAACAACCTG
TTGGTCGGACTCAAGGGCTCCAACACTGCCCAGCCCGTCAACGTTCAGGAGTGGAAGGAT
CGAAACAAGGACAAGGTTGCCCCCGAGGATGTCTTCTTCTATAACTACTTCCAGCCTAAG
CAGCTTAAGGAGGAGACCAAGAAGCTGTCCAAGGAGGATGAGTACCAGGATATCGGAGGT
GATTCTGAACTTGACGACGACGAAGTTTGGGATGCTATGGTGAAATCCCAACCCGACATT
GATCCCGAAGAAGACGACATCGATATGGACATGGACGACTTCTCTGATGACCCTGAGCTC
GACAAGATTGATGGTGAGCTCGAGGAGGGAGATTTCTCCGACTTCTCCGATTCTGATCTG
GAGGAGGAGAAGTCCGAGTCTGAGAAGCCCTCTAAGAAGGACGAGGCCGCCTTCTTCGAA
GAAGCTGAAGACGAGGATGAGGAAGGTGCTGCTGACTCTGATGATGAGCCTGCTCTAGAC
TTCTCTGACGATGAGGATAACCTCATTGCTTCTGACGACGAGGTCACTCTCAAGCGAAAG
GCCGGTGATGATGGAGACAAGAAGCAGAAGAAGAAGAAGTTTTCCGACCTGCCTACTTTC
GGCTCCATGGACGACTACGCTCAGTACCTGCAATCCGATGATGAGGACTTTTCTTAGAGG
GTGTATGAAAATAGATTATGGTAATAGATTGTTTTATGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15356g_CDS-001

Protein length: 1099 aa.
Product: Constituent of 66S pre-ribosomal particles, putative

>YALI0D15356g_CDS-001 MSLETSSFSNLADKIKAKLDTANDKNSKKKDAKNAVKAENKAKNDAREAKKKEHEQRKKE
EAEAMKKKAKNFNKSKFGKKEEEKVTEVKPSKTKGSDKTEKSKGSRTKSQDSSSDKSTKT
KTKTKEFKPDSLLAEILELGGTEEDLKLVEDLSDGEDDVVVNPSNGSKIDSGDLLKFMKD
IGLDGDVPQLVEDVKDEDVEEEQEEDDDEGMEDDEDEDTEEDDEESESDSDDEPAPAKPI
ISTGPSAKEKLVEAMSLPQDIKTPTAVPPRPDWYNHQIDVPETLEPISETDVESLKDQGM
KLLKQDQDTYKGNQQSSQQTFMQQMLTSGTLSDKISTYTLLIHDSPLHNLKSFEQLMYLC
KKKGRTSALQGLEALKDLFINAGVLPDRKLRWFKNQPVQKNSAPEYLAIWAFEDWLKTQY
FELLQIMEGISHDTVTHLRSSVVAHIVDLLKAKPEQEVNLLRLAVNKLGDKDTVVCSQTS
YHLLQLMQAHPAMKGIVINSIWELVFRPGSDYHSQYYSAITLNQSILTSRDTDLANTLVT
NYFLLFEKVLKENEADFDKDLTKKDAKDTKGKHKSRHNAGKGKKGGVKQQQKTVETQKDE
ANQKLISAILSGLNRAFPFSNLTEAEFSKHIDSLFRITHSANFGTAIQALSLLFQVCQDA
QKDRYYRTLYESLLDPRLVDSSKQGLYLNLLFKSIKADTNVQRVQAFAKRMVQVALGWLK
TGSVVGMVYLLGEVRKISGGVEALSNVSTGLEEFTDVKEEEDDGLMVNIDTSKKSVDSGE
SQTHKEDSYDGKKRDPLFANANTTSLYELQFLLRHYHPSVTAYAENYVNRGESLAKPDLD
LHSLAHFLDKFVYRNPKQQQKLKGNSIMQPLAGGAAANNLLVGLKGSNTAQPVNVQEWKD
RNKDKVAPEDVFFYNYFQPKQLKEETKKLSKEDEYQDIGGDSELDDDEVWDAMVKSQPDI
DPEEDDIDMDMDDFSDDPELDKIDGELEEGDFSDFSDSDLEEEKSESEKPSKKDEAAFFE
EAEDEDEEGAADSDDEPALDFSDDEDNLIASDDEVTLKRKAGDDGDKKQKKKKFSDLPTF
GSMDDYAQYLQSDDEDFS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG