YALI0D15304g

Overview

Description weakly similar to uniprot|P32521 Saccharomyces cerevisiae YIR006c PAN1 actin-cytoskeleton assembly protein
Locus type CDS
Locus tag YALI0D15304g

Location

Species Yarrowia lipolytica Positions 1860078..1865294
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 5217 (nuc.)
Previous locus YALI0D15268g Next locus YALI0D15312g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15304g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15304gYALI0D15304g_mRNA-001YALI0D15304g_CDS-001

Nucleotide sequence

 

>YALI0D15304g
ATGTACGGATATCAAGGAACCGGTGGCCAACAGCCTCTCGGAGCCCAACCGACAGGTTTT
GGATTCGGCAACACACCCGTGCAGCAACAGCAGCAGCCAATGCAGCCGATGCAGCAGTCC
CAGCCTACTGGCTACCAAGCTCCTGGAGGTTTCCAGAACTACCAGCCCACGGGATTTGCT
CAACAACAGCAACAGCAGCAGCCTCAGCAGACAGGATTCCAGTCTATGCAGCCGCCTATG
CAGCAGACAGGATTCCAGTCCCAGCCCAATGTGTCAATGTACCAAGGAGGAGGAGGTCAG
GGCTACCAGTCCGCTCCCATGTTGCATCAACAGACAATGCAGACCGGCTACCAGCCCCAG
CAGCAGCAGCCCGGATTCACTGGATTCCAGCCCCAGCAGCAGCAGCAGCAGCAGCAGACG
GGATTCACTGGCTTCCAGCAGCAACCCCAGCAGCAGCAGCCCGGATTTACGGGATTCCAG
TCCCAGCCTACTGGCTACAATGCCAATGCTTCTGCTCCAGCTGCTACCCCCGCGGCTCCC
CTACAGCAGCAAAAGACTGGTAACGCTAGAGATCCCTTTGCCCCTACTCTGCCTGCTCGA
CCTCCGTTGACTTCCCAGCCCACTGGAGGAGGCAACAAGAGTGTGGTGGATGGTGTCTAC
ATCCCCAACGGTGAGTACTAACAGTAGATGATTGCTACGACAACACAAGTGATTCAAGGA
GCAAAGCCAATTGAGTATGACGAGATACGATGGAGACACAACATTTTGATCTGTAACCTT
GAGACCCAAACACAGGAAGACCGATGATGGAGATACACAATCTGATCATGAGATCTGTCA
AACTGCCGCCGTTTCCATGACTTTGAAACTCCCAGTTGCCGTCTATGCGTGCACACACCT
TGCGATCACCCTTATCTGTTCGCCTTAGCTAACCAAGTCCGACTCTCTTTCCTCACTGCC
GATGACCAGCGAAACTTTGAAAACCTCTTCCGACAGGCACTCCCTAAGGGTGAGCAAGCT
CTTTCCGGAGACAAGGCTCGAGACATCCTGTTCCGATCAGGTCTCCCTCCTATCACCTTG
TCTGCCATTTGGAATTTGGCCGACACCACCCGTTCTGGCGCTCTGCTCTTCCCTGAGTTT
GCGGTTGCCATGTACCTGTGTGGCCAGGCTGTCAAAGGCCAGACCGTGCCGAACAACCTG
TCTGAGAACATCAAGAACGAGGTTTCTAGCATGGTCGACATCATTTCGTTCAACATTCCC
GATGCTGGATCACGCCCTTCGTCCTCTGGCCAGTCTGTTCCCCAGTCTCAGCCTCAGCAG
CAGCAGCAGCAGTCCAGTGCATCTATGCTTGCTGGACTGAATCTTGGCCAGCCGACAGGT
TACCAGCAGCAGCAGGCTACAGGATACCAGCCCATGCAGCAGCAGTCCACGGGCTACCCG
ATGCAGGCCATGCAGCCCCAGATCACTGGAGGTATGCCTCTGCAGCAGCAGAGAACTGGA
CCCATGCAACCTTTGCAGCAGCAGTCCACTGGCTACGCACCCCTTCAGTCTCAGCTCACT
GGCGGTGCTCCCCTTCAGTCTCAGCTCACTGGCGGTGCTCCCCTCCAGTCTCAGCTCACT
GGCGGTGCTCCCCTCCAGTCTCAGCTCACTGGCGGAGCCCCTCTGCAGCAACAGTCTACT
GGTTACGCTCCTCTTCAGCAGCAGTCTACTGGTTACGCACCCCTTCAGCAGCAGTCGACC
GGATACATGCCTCAGCAGCAGACTGGTATGCAGCCACAGTCTACGGGCTATGGATCCATG
CAGCCTCTCACTGCCATGCCTACTGGTAAGCCTGGTCAGTGGGGCTTTATCAACACCCCC
TCGCAGGGTCTGCCCGGTATCGAGACAATGCAACAGCGCCTCATGCCCCAGGCCACCGGT
GCTCCCGTGCAACAACTGCCCCCTATGCAGCTGCAGCAGTCTGCCACCGTCAACTGGGCC
ATTGCCAAGGAGGAGAAGCAGATCTACGACGGCATCTTCATGGCTTGGGACAAGAAGCGG
GCTGGAGCCATTGACGGTGACACCGCCATCAAGATCTTCACCCAGAGTGGACTCAACCGA
GCCGACCTGGAGGCTATCTGGACTCTGTCCGACCCCTCCAACAAGGGTCGCCTGGACCGA
GATGAGTTTGCTGTTGCCATGCATCTCATCTACCGACATCTCAACGGCTACCCTATTCCT
TCTCGTCTGCCTCCGGAACTGGTCCCTCCTTCTTCTAAGAACTTTTCCGACTCGGTGAAC
CAGGTCAAGAGCTACCTCAAGGCTGGTGGGGGCAGAACTGGTGGCTCCAAGCTCAAATCG
CGGTCTTTCACCGGTGACTCCACCATTAAGAAGGACGCCACCGTGTTCAAGAATGACGAC
TCCGACTTTGGCTACACTTCTCGAAACCGGCGAGGAGGCAGCAGTAGCACTGCTAGCAGC
AATGGCTCCAGTGGAAACGACATCTCTCTGTCCGGCAAAGGCTCCTCTATTTCCGAGCTC
AAAAAACTCATTCGAGAGAAGCAGATTCTATTGGACGCCATTGACGCTGAGGACTCGGAC
ATGTCTCGTGACTCCAACCTGGAGCGACGTGACCAGGAGGCTGTTGCCGATCTGAAGCGT
CGAATCCAGAACGTGCAGCGCGATATCGATGTAGCTCCTCATAGTGCCATCTCCACCGAT
GTCGGTGCTTCTGCAGATGCCAAGCGAAACCTGATGCGAAAGCTGGACCACCTTGGTGAC
AGACTTCCCCAGCTTGCCTCCAATGTTCGAAGAATCGAAGATAAAATTGCCAATGCTAAG
ATGGAGCTGTTCCGACTTAAGAACCCCACTTCGCTGGTTGGTACTGGTCCTGGAGGAGCA
ATCACTGAGGCTGATCGAATCAAGGCTCGTTCCAAGGCGAAGCTGCAGGCTCGAATGGCT
GCCCTGACTGGAAAGGGGACTACTACCGGTGCCGACGCCTCTGAGGAGGAGGACTACGAG
CATCGTCTGCTGACCCACACTTCAGAGGTTGAGCGATCCAAGGCCCAGAACTACGAGATG
ATCCACGACATTGAGGATTCCGTCAAGTCGCTGCAGCGAGACTTGTCCTCCAAGCTGAGA
GAGACCCAGGAGGAAGTGAGTGAGGACCGACAACGACGACGATGGGAGGAGGCTGTTGGT
GTGGAGGATGATGTTCGACAGTTTATCTACTCTCTACGATCCACCCGATCGTCGAGACCT
GCCCCTGCTACTGCCTCCTCTTCTGCCCCTGCTACTGGCTCTCCTGCCACTGCAGCTCCC
ATTTCGGCTACTTCTACTGGCGCCTCCACCCCCTCTGCTCCTGCTGCTGGTGTGGACCGA
AAGGCCCAGCTCAAGGCTGAGGCTGAGCGAAAAATGAATGAGCGACTTGCCGCCCTCGGT
ATTAAGCGAAAAGAGAAGGCGCAGGCCCACGGTTTTGCCCCCCCCGATGCCAAGCCTGCC
GAGGCTTCTCCTGCTGCCTCCCCTGCTGTTGCCTCCCCTGCTGTTGCCTCCCCTGCTGCC
ACACCAGCTGTTTCTTCCCCCGCCCCCGTTTCTCGTGGAGTACCTGCTCCGGCTGCTGCC
ACACCGGCCACGGATCCTGCTACTACGCCTGCTGTACCAGTTTCTGCACCTGCCGACGAC
TCTGACTCAGACGATGAAGAGTACGAAAAGCTCATGGCTCAGAAGCGTGAGCAGGAAGAA
CGGTTTAAGAAACAGCAGGAGGCTGACAAGAAGAAGGAAGAAGAGAAGAAGCAGAAGAAG
GCCGCCAAGGAGGAGCGAATGCGAAAGCTTCGAGAGGAAATGGAGGCCAACGAAGCCCGA
GAAAAGGCCTGGAAGGAGTCCCAATCCAAGGAGGCCGAGGCTGATGAAGCTGAGGGAGAT
GTTGGCGCCGCCGCCCTTGCTGCTTTCTCTAACAAGGCTACTGCTCCCTCTACTACTCCC
ACCGCTGTCGCCGCTACTCCTCCCGTTGCCACATCTACCCCGTCACCGGCAGCTCCCACA
GTCCCCGCTGCTGACGACAACAACCCCTTCCATCGCCTGAACAACGGTGGTGATGCTGCC
GCTGCAGCCCCAGCAGCTGGAGGTGAGGACAATAATCCTTTCCTGCGACCCGGCACCAAC
CAGCCCATCGCGGCACCTTCTCCTGCCTCCTTTTCTGAAGCTCCCAAGGAGGCCCCCAAG
CCCGTGGACCCCGTCAAGATCTCCAACCAGCGAGCCAACCAGCGAGCTGCCAAGAATGAC
GACGATGATTGGGGAATGAGCAGTGACGAGGACGACGACCAGGACTATCACCGAGGTAAC
GCTGCCGAGCTGGCTTCCCAGCTATTCCGAACCATGGCTCCCCCCATCCAGAGACAGCCC
ACTGGGGGTGCGCCCATCACAGCCACTCCTACGGGTTCGGCCCCTGCTGCTCCACCCGCT
GCACCTCCTGTTGCCCCTGCTGCTGTTGAGGTCGCAGTTGCTGCCTCGGAGGCTACCCCA
GGACCCGAGTCTGCTCCCCCTGCACCTCCCATGCCCGAGATCAACATCCCCCCTGCTACG
GAGGCACCCTCTGCTCCTGCTGCCACGGAGGCACCCCCTGCTCCCCCCTCTGCGCCTACC
ACCATCGAAACTACCCACTTGCCACCTCCCGTGGACACTCACAACGACATGTCGTCGTCG
GAGTTTGATTTCGAGACACCCGAAGGTTCCCCCACACAGCAGACCTTTGCAGAGGCAGCA
CCTCCCGTCGCAGCCCCTCCTCCCCCTCCCCCCACCGCTGCCGCCGCAGCCCCTACGGGT
ATCCCTCCTCCTCCTCCTTCCGCCCCCGGCTTTGGAGCTCCTGAGGCACCTTCCGGAATC
CCCCCTCCTCCTCCTCCTGCACCTGGATTTGGGGCCCCTCCTCCTCCCCCTGGGCCAGCT
CCTTCCTTCGATGCCCCTGGAGGAGCCCCTCCTCCACCTCCTCCTGGACCTCCTCCGCCT
ATGTTTGGAGCCCCTGCTCCTCCATCCATGACTGGTCCTTCGGCTGGCGATCTCCCCGAG
CGTCCCCCTGCTGCCACTGGCGGTATTACTGCCCTGCTTGGTGAAATCACCGGCGGAAAG
ACACTCCGACGAGTGGATGACAAGGACAAGAAGATTTCTTCAAACCCCAGCGCTGGTGCC
GTTCTCAACTAAGAGGTGCGAGTATGTATGTTATGTATGTCATGAATGATTTGTTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15304g_CDS-001

Protein length: 1635 aa.
Product: Conserved hypothetical protein

>YALI0D15304g_CDS-001 MYGYQGTGGQQPLGAQPTGFGFGNTPVQQQQQPMQPMQQSQPTGYQAPGGFQNYQPTGFA
QQQQQQQPQQTGFQSMQPPMQQTGFQSQPNVSMYQGGGGQGYQSAPMLHQQTMQTGYQPQ
QQQPGFTGFQPQQQQQQQQTGFTGFQQQPQQQQPGFTGFQSQPTGYNANASAPAATPAAP
LQQQKTGNARDPFAPTLPARPPLTSQPTGGGNKSVVDGVYIPNVRLSFLTADDQRNFENL
FRQALPKGEQALSGDKARDILFRSGLPPITLSAIWNLADTTRSGALLFPEFAVAMYLCGQ
AVKGQTVPNNLSENIKNEVSSMVDIISFNIPDAGSRPSSSGQSVPQSQPQQQQQQSSASM
LAGLNLGQPTGYQQQQATGYQPMQQQSTGYPMQAMQPQITGGMPLQQQRTGPMQPLQQQS
TGYAPLQSQLTGGAPLQSQLTGGAPLQSQLTGGAPLQSQLTGGAPLQQQSTGYAPLQQQS
TGYAPLQQQSTGYMPQQQTGMQPQSTGYGSMQPLTAMPTGKPGQWGFINTPSQGLPGIET
MQQRLMPQATGAPVQQLPPMQLQQSATVNWAIAKEEKQIYDGIFMAWDKKRAGAIDGDTA
IKIFTQSGLNRADLEAIWTLSDPSNKGRLDRDEFAVAMHLIYRHLNGYPIPSRLPPELVP
PSSKNFSDSVNQVKSYLKAGGGRTGGSKLKSRSFTGDSTIKKDATVFKNDDSDFGYTSRN
RRGGSSSTASSNGSSGNDISLSGKGSSISELKKLIREKQILLDAIDAEDSDMSRDSNLER
RDQEAVADLKRRIQNVQRDIDVAPHSAISTDVGASADAKRNLMRKLDHLGDRLPQLASNV
RRIEDKIANAKMELFRLKNPTSLVGTGPGGAITEADRIKARSKAKLQARMAALTGKGTTT
GADASEEEDYEHRLLTHTSEVERSKAQNYEMIHDIEDSVKSLQRDLSSKLRETQEEVSED
RQRRRWEEAVGVEDDVRQFIYSLRSTRSSRPAPATASSSAPATGSPATAAPISATSTGAS
TPSAPAAGVDRKAQLKAEAERKMNERLAALGIKRKEKAQAHGFAPPDAKPAEASPAASPA
VASPAVASPAATPAVSSPAPVSRGVPAPAAATPATDPATTPAVPVSAPADDSDSDDEEYE
KLMAQKREQEERFKKQQEADKKKEEEKKQKKAAKEERMRKLREEMEANEAREKAWKESQS
KEAEADEAEGDVGAAALAAFSNKATAPSTTPTAVAATPPVATSTPSPAAPTVPAADDNNP
FHRLNNGGDAAAAAPAAGGEDNNPFLRPGTNQPIAAPSPASFSEAPKEAPKPVDPVKISN
QRANQRAAKNDDDDWGMSSDEDDDQDYHRGNAAELASQLFRTMAPPIQRQPTGGAPITAT
PTGSAPAAPPAAPPVAPAAVEVAVAASEATPGPESAPPAPPMPEINIPPATEAPSAPAAT
EAPPAPPSAPTTIETTHLPPPVDTHNDMSSSEFDFETPEGSPTQQTFAEAAPPVAAPPPP
PPTAAAAAPTGIPPPPPSAPGFGAPEAPSGIPPPPPPAPGFGAPPPPPGPAPSFDAPGGA
PPPPPPGPPPPMFGAPAPPSMTGPSAGDLPERPPAATGGITALLGEITGGKTLRRVDDKD
KKISSNPSAGAVLN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG