YALI0D15268g

Overview

Description similar to uniprot|P53852 Saccharomyces cerevisiae YNL247w cysteinyl-tRNA synthetase
Locus type CDS
Locus tag YALI0D15268g

Location

Species Yarrowia lipolytica Positions 1857268..1859722
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2455 (nuc.)
Previous locus YALI0D15246g Next locus YALI0D15304g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15268g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15268gYALI0D15268g_mRNA-001YALI0D15268g_CDS-001

Nucleotide sequence

 

>YALI0D15268g
ATGGACTCCTCCGCCGTTAAACAACCCGAGTGGCACGCTCCGAAAGAGCCCCAGTCTCGT
GACACCCTGAAGCTGTACAACTCGTTGACTCGATCCAAGACTGCTTTTGTTCCCATTGCT
GGCAACAAGGTCACCTGGTACTGCTGCGGGCCCACCGTCTACGACTCCAGCCACATGGGC
CATGCCCGAAATTACGTTAGCACCGACATCAACCGACGAATTCTACAGGACTACTTTGGA
TACGATGTTCTGTTCGTGCAGAATGTGACTGACATTGACGATAAGATCATCATCCGAGGC
CGACAGCAACACCTGTTCCAAAAGTACGTTGAGGAGAACAAGGGTCTGTCTCAGGAGGTG
CTGTCAAAGGTTCTCAGCAGCTGGAACGATTTCGCCAAGGACAAGCTCGGTTACACTGAT
GAGGTTGCCGATTTCGAGAAGTACGTGGAGTCGGAAACAACTAAACTCAAGTCAATCGAA
GACGCCAAGTTCAAGATGAACCTAGCAAGCGCACAGGCTGCTGCTAAGGCTCTCACCGAC
AAGACCGTCACACCAGACATTTTCTACCCTGCTGTCAAGGATGTTCTTGTGCTCACACTG
GATCAGGAGCAGGGCTCCACCGTGTCGGACCACAAGATCTTCCGAGAACTGTCTGCGTTC
TGGGAGGGTGAATTCGACAAGGACATGGCAAAACTCAACGTTCTGGCCCCCTCTGTCACA
ACTCGTGTCTCTGAGTACGTTCCTGAGATTGTCGAGTACGTGGAGAAGATCATCGACAAC
GGCTACGCCTACGTCAGCGATTCCGGCGTGTACTTCGACACCGCTGCCTTCGACAAGTCC
CACGACTACGCCAAGCTCCAGCCCTGGAACAAGGGCCATGCTGACCTGATTGATGAGGGA
GAAGGTTCTCTTTCCAATAAGACTGGCAAGCGAAATTCCTCTGATTTCGCCCTGTGGAAG
GCCTCCAAGCCCGGTGAGCCCTTCTGGGACTCTCCTTGGGGTCAGGGACGACCTGGATGG
CACATTGAGTGCTCTGTCATGGCTTCTGCCATTCTCGGTCCTCAGATGGACATTCACTCT
GGAGGTATTGATCTGGCATTCCCTCACCACGACAATGAGCTTGCCCAGAGTGAAGCCCAT
TACGACTGCAAGCAGTGGGTCAACTACTTCCTTCACACTGGCCACCTACACATCGAGGGT
CAGAAGATGAGCAAGTCTCTGAAGAACTTCATCACCATTGACGAGGCCCTCCAGACCTAT
TCTCCGCGGCAACTCCGTCTGGCGTTCGCCCTTCAGCAGTGGAACAACCAACTCGACTTC
AAGTCTGCCCTGATTTCCGAGGTCAAGTCCGTGGAGTCCACCTTCTCAAAGTTTTTTGCC
AAGGTCCGTGCTCTCAAGGGCGAAGTTGAGGACAAGGTTTCAAAGGGTGTTCTTGTTTCC
AAGAAGACCGGCCCTGCTGAGCTTGCCCTGCTGAACGCTCTGTCCGACTGCAAGGAGGCC
GTTCACATTGCTCTCTGTGACAATCTGGCCACACCTGCTGCTATTCAGAACATGGTGCAG
CTTGTTGGCAAGGTCAACCTTTACCTTGGCGAGACTTCCACCGAGAATGTGCGAACTGAG
ATTCTGGTTGATGTTGCCACCTTCATTAGCAAGATGTTCGCCGTCTTTGGTTTCCGAACT
CGAACTGACAACCTGGGTTTCACCGAAGAGTCTTCCGAGGCTTCTTCCGAGGCTCTGATC
ATGCCCTACCTTACCACTCTGCGAAACTTCCGGGACGACATTCGAGGTAAGGCTATGGCT
CGAGCCGCTCATCTCGAATTCCTGCAGGCCACTGATCAGGTGAGATTCGACCTGCTTAAG
CAGGGCGTTTCCCTTGACGACCGTGGTGTCGGCGAGCCTGCCCTGATCAAGATTCTGTCC
GATTCTGAGAAGCTGGAGCTGATCAAGGCACAGGAGGAGAAGGAGAAGCGAGCTGCGGAG
AAGGCTGCCAAGCGAGAGGCCCAGGCCAAGCTGGAGGCGCAGAAGGTTGCCGAGAGAGAG
GCCAAGGCTAAGATTGCTCCCAAGGATCTGTGGAAGGATGACCCCGCTTATTCGCAGTGG
GATGAGGACGGAATCCCAACCCATAACGCTGAGGGTGAAGCTATTTCTAAGAGTCTCAAG
AAGAAACTTACCAAACAGCATGAGGCCCAGAAGAAGCTGTATCATGACTACGAGGGACAG
ATTTTGGAGTAAGCGCCCAACCAAGTGCGACCAATTACGCATAGCGTGCACCACGTGAGA
GTGTTGGGTTCATCAGTGTGGAACAAGAGTCGTTGAGACCAATGCAAATAAGAGCTCTCT
TAGACTCGTGGTCCTAATGGCATATTAACCCGACTCTGTTGACTTATACCGATACATTTA
TTAGTAGAAGGAGTATATAGGATTTGAAAATGAATTTCTTGACCGTGTAGCTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15268g_CDS-001

Protein length: 744 aa.
Product: Cysteinyl-tRNA synthetase, putative

>YALI0D15268g_CDS-001 MDSSAVKQPEWHAPKEPQSRDTLKLYNSLTRSKTAFVPIAGNKVTWYCCGPTVYDSSHMG
HARNYVSTDINRRILQDYFGYDVLFVQNVTDIDDKIIIRGRQQHLFQKYVEENKGLSQEV
LSKVLSSWNDFAKDKLGYTDEVADFEKYVESETTKLKSIEDAKFKMNLASAQAAAKALTD
KTVTPDIFYPAVKDVLVLTLDQEQGSTVSDHKIFRELSAFWEGEFDKDMAKLNVLAPSVT
TRVSEYVPEIVEYVEKIIDNGYAYVSDSGVYFDTAAFDKSHDYAKLQPWNKGHADLIDEG
EGSLSNKTGKRNSSDFALWKASKPGEPFWDSPWGQGRPGWHIECSVMASAILGPQMDIHS
GGIDLAFPHHDNELAQSEAHYDCKQWVNYFLHTGHLHIEGQKMSKSLKNFITIDEALQTY
SPRQLRLAFALQQWNNQLDFKSALISEVKSVESTFSKFFAKVRALKGEVEDKVSKGVLVS
KKTGPAELALLNALSDCKEAVHIALCDNLATPAAIQNMVQLVGKVNLYLGETSTENVRTE
ILVDVATFISKMFAVFGFRTRTDNLGFTEESSEASSEALIMPYLTTLRNFRDDIRGKAMA
RAAHLEFLQATDQVRFDLLKQGVSLDDRGVGEPALIKILSDSEKLELIKAQEEKEKRAAE
KAAKREAQAKLEAQKVAEREAKAKIAPKDLWKDDPAYSQWDEDGIPTHNAEGEAISKSLK
KKLTKQHEAQKKLYHDYEGQILE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG