YALI0D14762g

Overview

Description similar to uniprot|P22007 Saccharomyces cerevisiae YDL090c RAM1 protein farnesyltransferase, beta subunit
Locus type CDS
Locus tag YALI0D14762g

Location

Species Yarrowia lipolytica Positions 1797895..1799233
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1339 (nuc.)
Previous locus YALI0D14740g Next locus YALI0D14784g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D14762g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D14762gYALI0D14762g_mRNA-001YALI0D14762g_CDS-001

Nucleotide sequence

 

>YALI0D14762g
ATGGCTCGTCTACCGTCGTCCATTCTGGACTATATTGCGGCGCAGCAGAACCGACACAAA
CTGCGCAACATGACACACATTCTCACGTTACCGATCCGAGACTCGTATGTCACGGAAACA
AGTGAGCTGCAAAACGCCACAGAAGAACAGATTGTCGCCTGTCTGGAGAAATCACGCGAC
CAGGTCAGATCTCTGGAGACAGAGAAACACGTGAATTTCCTCAACATGTTTCTGAGCCCG
GACGCTCCTCTTCCCGACAAGTTCACTGGACTGGATGCGTCTCGAGCCTGGCTGCTGTAC
TGGTCAGCAAACGCCATCAGAGTGCTGGGAGGCGAGCTGAGCGACGAACAGAAGAAGGGA
ATACCCCTGACTCTGGAATCGTTTAAGGAGGACGGTGTATTTGGAGGTGGATCAGGCCAA
GACGCACACGCGGCTTCAACATACGCCGCCTTCCTCGCTCTGGCTGATTCGGACGATGAG
GATGCCTGGGGTCGCCTAATCAACCCCGAAGAGGTTCTCAAACACAACCTGAAGCTAAAG
TCACCAGATGGAGGGTTCGCTTCCAACGTGGGTGGCGAGACTGACGTGCGAGGCACCTAC
TGTCGATTAGTGGTGGCCTCTCTGACTAACACACTGACAACGGAGCTTACCGACGGCGTC
ATTAAGTACATTGCTTCATGTCAATCGTACGAGGGAGGTTTCGGTGGTAGCCCTGGCAAT
GAGGCCCACGCCGGCTATACTTACTGCGCGCTTGCTGCCCTGGCCATTCTGGTGCCTATT
AGGGAGATGGATCAGTATGTCAACGTTGAGTCGTGCCTTGCATGGTTGTCTGCTCGCCAG
TACCAGCCCGAGGGCGGTTTCTCTGGCCGAACCAACAAACTGGTTGATGCTTGTTACGCC
TACTGGGTGGGAGCCTCTCTCGTGCTCATCAATGGAGCTGTGCATGCTGGTCCTTCTCTT
TGGGACCGAAAGCAGTTGGCTCAGTACGTTCTCAACTGTTGCCAGCAGTCTGGAGGAGGT
CTTCGAGACAAGCCTGGCTGCAAGGCCGATGCCTACCACACCAACTACGCTGCCTGTGGA
ATCGCCATGTCTCAGTACATATACTTCCCCGAGGGCGAGAATGGTTTGTATTGGCAGGCC
ACCAGTTGCGATGGAGCCGATACTAGCATTTGTCCTGTCAACCCTGTTTATGGTGTTCCT
CTGGGTGTGGCTGAGCGGATGAGACTGTACTTCACATTGAAGGAGGAGAATCTCAAGTGA
GCTAAACGACGCAGAATTTTAACCAACGTCATTTCAACTCATTCTGATATATACTTGAAA
AAAAATTTGTACATCATTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D14762g_CDS-001

Protein length: 420 aa.
Product: Beta subunit of the CAAX farnesyltransferase (FTase), putative

>YALI0D14762g_CDS-001 MARLPSSILDYIAAQQNRHKLRNMTHILTLPIRDSYVTETSELQNATEEQIVACLEKSRD
QVRSLETEKHVNFLNMFLSPDAPLPDKFTGLDASRAWLLYWSANAIRVLGGELSDEQKKG
IPLTLESFKEDGVFGGGSGQDAHAASTYAAFLALADSDDEDAWGRLINPEEVLKHNLKLK
SPDGGFASNVGGETDVRGTYCRLVVASLTNTLTTELTDGVIKYIASCQSYEGGFGGSPGN
EAHAGYTYCALAALAILVPIREMDQYVNVESCLAWLSARQYQPEGGFSGRTNKLVDACYA
YWVGASLVLINGAVHAGPSLWDRKQLAQYVLNCCQQSGGGLRDKPGCKADAYHTNYAACG
IAMSQYIYFPEGENGLYWQATSCDGADTSICPVNPVYGVPLGVAERMRLYFTLKEENLK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG