YALI0D14784g

Overview

Description weakly similar to uniprot|O74498 Schizosaccharomyces pombe Hypothetical protein with UBX, Domain present in ubiquitin-regulatory proteins
Locus type CDS
Locus tag YALI0D14784g

Location

Species Yarrowia lipolytica Positions 1801007..1802750
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1744 (nuc.)
Previous locus YALI0D14762g Next locus YALI0D14806r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D14784g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D14784gYALI0D14784g_mRNA-001YALI0D14784g_CDS-001

Nucleotide sequence

 

>YALI0D14784g
ATGTCTTCGATAGAATCTCTGCCCACTGACCAGCGGGAGAAAGTCGAGTCGTTCGTGTCA
ATCACGGACTGGAAGGGAGACCCCGCGCTAGCCGTGGTGCTGCTGCAGTCGTCTCAATGG
AACCTCGAACTGGCGCTGTCTCGACACTTTGATGGAGCAACCGGCGATTTGAACACAGAA
ACATCGACACAAACACAAGAGTCGTCCCGCCAGGGCTTCTCCCCGGGCGACTTTGTGGCA
GACGACGACGACATTCCGGGAATCCCCCACTCTGCAAACACAAACTCAGACAACCACGAG
GTTGTCGACACAAATCACCCCCCCAGCGGGCCGTCATACTTCCAGACGCGGCTCAAGAGC
CTGCTGCTGCTGCCGTTCACAGCAGCCTACAAGGCCGTTTCCTCAATCTTCTACGTCCTG
TCTACCGTGCTGCCCTTCCTGCCACGTATCACCGGAATCTACCCCTCCAACAGAGGAGCT
GCACACTCGGAACGCAAGTCGATAAACCCCAGAGATACAGCCGCACGGTTCATCCGCCAC
TTTGAGGATACCTATGGCAACGAACACGGCCTGGAAATGTTCGAAGGAGGATACTCGCAG
GCTTTGGACACCGCCAAGCGAGATCTGCGATTCCTGGTGGTGTTGCTCATGTCCCCTGCT
CATGACGATACCCCCGCCTTCTACCGGGACATTTTGTGCTCAGCCCAGGTGGTGGCGTTC
CTAAAGGAAAACCACGTCATTGTGTGGGGTGGTGATGTCCGGGAGAGTGAGGCGTTTCAG
GTAGCGTCCCAGCTCAAGTGCACCTCGTTCCCCTTCTCCGCTCTTGTGGCTCCTTCACCT
AGATCGGGCTCCAACATCCGTGAGATGATTGTGCTTCACAAGATCCAGCATCTTGTCACT
GCTCCTCGGTGGATCCATGCCCTGGAGCAAGGCATCAACGGCCACCGAGGCAAGCTCGCG
TCCCTGGCCATGGACCAACAGGAGCGGGACCTCACCCGACGACTCCGTCAGGAGCAGGAG
GAGGCCTACGAGCGATCGCTCGCCCAGGATCGAGCCCGAGACCAACAACGAGCCCGGGAA
CGGGAGGCAGTGGCCGAAGCCGAACGTGCGGCAGCCGAAGCCGAGCGACACAAGGAGCTC
CAGGCCCAAAAACGTCAGCAGTGGATCAAATGGCGGGCTGGAAAGATCAAGGAGAAGAAG
GAAGATGATGCCTCCACCCCTACTGCCCGAGTGGGTATTCGTGTGCCTTCCGGTACTCGG
CTGAACTGCAAGTTCCCCGCCTATTCGACTCTGGAGGATCTCTACGCCTATGTGGAGTGT
CACGAGCTGTTGAACGGCGATGACGACTTTTCGGACGTGGAGAAACCCGAAGACTACGAC
CATGAGTACTCCTTTGAGCTGGTTTCACCCATGCCCCGAAAGGTGATCAAGCCGGTGACG
GATGTGACTGTTCAGGAGGAGCCTGCCATTTGGCCCAACGGAGCATTGAACGTGGAGGTG
GTTGACGAGGAAGAGGACTAAGAGACAGCAACATCCAATACTTTGAAGAAGCTGACAATC
TAGTGTACTGTACCTGATGTGTCTCAAAGTCGCAAGTACATCTTTGGGTGTTCCCGTGGC
AGGAGCTCACGGTGCTCTTCGCTAACAGGTACATGTGTGTATATGCGCATGCGCGTATTG
TATCGTAAAGTACTTTCAAATATTAAAGACTGTATATATAATGAAGTATACGGCAGTTCT
TGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D14784g_CDS-001

Protein length: 507 aa.
Product: Conserved hypothetical protein

>YALI0D14784g_CDS-001 MSSIESLPTDQREKVESFVSITDWKGDPALAVVLLQSSQWNLELALSRHFDGATGDLNTE
TSTQTQESSRQGFSPGDFVADDDDIPGIPHSANTNSDNHEVVDTNHPPSGPSYFQTRLKS
LLLLPFTAAYKAVSSIFYVLSTVLPFLPRITGIYPSNRGAAHSERKSINPRDTAARFIRH
FEDTYGNEHGLEMFEGGYSQALDTAKRDLRFLVVLLMSPAHDDTPAFYRDILCSAQVVAF
LKENHVIVWGGDVRESEAFQVASQLKCTSFPFSALVAPSPRSGSNIREMIVLHKIQHLVT
APRWIHALEQGINGHRGKLASLAMDQQERDLTRRLRQEQEEAYERSLAQDRARDQQRARE
REAVAEAERAAAEAERHKELQAQKRQQWIKWRAGKIKEKKEDDASTPTARVGIRVPSGTR
LNCKFPAYSTLEDLYAYVECHELLNGDDDFSDVEKPEDYDHEYSFELVSPMPRKVIKPVT
DVTVQEEPAIWPNGALNVEVVDEEED*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG