YALI0D13794g

Overview

Description highly similar to uniprot|Q3E754 Saccharomyces cerevisiae YJL136C (ohnolog of YKR057W) RPS25B 40S small subunit ribosomal protein
Locus type CDS
Locus tag YALI0D13794g

Location

Species Yarrowia lipolytica Positions 1710448..1711299
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 852 (nuc.)
Previous locus YALI0D13772g Next locus YALI0D13840r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13794g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13794gYALI0D13794g_mRNA-001YALI0D13794g_CDS-001

Nucleotide sequence

 

>YALI0D13794g
AAATGGAAAACGATCAGGGTGTCCTTGTGAGTATTGGCGGCTGGAATGAGATATGGGAGA
GCAATAAGACGAGAATCGACAAGACGAACGATCAAGAAAACCCCGACCCATAATGACCAG
TAACGACTGGTAACGACAAGGCACGCGACTGGAACGACAGAAACGATAAGGCACACGAGA
CATGGGTTGGATAGATCAGGAATACATGAGGCAAGCGTGATACCAGGGAGTTTTCGGACA
TGGTGTGATTTTGCAGAGGTTCAGAATGTGCGGAGACGATCTGTTTGTGGTTGTTCCTGT
GTCTATGTCTGACTCTGTTGTGTCTGATTCTAAGTATGTCTGTGCCTGTTCTGAGTCTGA
GCATGCGCCTGTTTCCGAGCGTGTGTCTGTGTCTTGTGCCGAGTTGTGCCATGTTTGTGC
CTGTGTGAGTTATGAAGAGGTGTCATGTTGCATTGTGTTGCGTGAGACTTTGTTCTATAT
CTCTGGGTCTGGTTTTGTGTCTCTCGTCTTGTGTCACTTGACTTAATGAACCCGCTAACC
CAGGTCGAGCTTTACGTTCCCCGAAAGTGCTCTGCCACTAACCGAATCATCAAGGCTGAT
GACCACTCCTCCGTCCAGATCAACGTGGCCAAGGTTGACGAGAACGGCCGAGCCATTGCC
GGTGACAACATCACCTACGCTCTGTCCGGCTACGTCCGATCTCGAGCTGAGGCTGACGAC
TCTCTCAACCGACTCACCCAGCAGGACGGTATCCTCAAGAACGTCTGGTCTTACTCCCGA
TAAGTTATAAGTTGGTTTCGTTGAAATTGGTTTATTAAAATAAAATGTTGATTAGAATGA
GTCTTGTGTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D13794g_CDS-001

Protein length: 88 aa.
Product: Ribosomal 40S subunit protein S25, putative

>YALI0D13794g_CDS-001 MENDQGVLVELYVPRKCSATNRIIKADDHSSVQINVAKVDENGRAIAGDNITYALSGYVR
SRAEADDSLNRLTQQDGILKNVWSYSR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG