YALI0D13840r

Overview

Description	weakly similar to uniprot\|P45978 Saccharomyces cerevisiae YPR129w SCD6 suppressor of clathrin deficiency; Pol II C/D snoRNA monocistronic snR52-B
Locus type	CDS
Locus tag	YALI0D13840r

Location

Species	Yarrowia lipolytica	Positions	1714748..1714836
Strain	CLIB 122	Strand	Antisense
Chromosome	YALI0D	Total length	89 (nuc.)
Previous locus	YALI0D13794g	Next locus	YALI0D13860g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13840r oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

The whole locus region.
Transcribed regions (translated part).
Transcribed regions (untranslated part).
Intronic regions.
Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.

Nucleotide sequence

>YALI0D13840r
ACCACAATGATGAAGCATTAGGATGTAAATTATTTCACCCGAGAGCGCAAAAAACCGTGC
GGATATTTCCTGCCTTCCTTCTGATTTTG

Legend

Locus sequence
Up/downstream sequence

Translation(s)

YALI0D13838g_CDS-001

Protein length: 293 aa.
Product: Conserved hypothetical protein

MSQFIGKTISLISNSDIRYLGVLHEINSEESTVSLMKVRTFGTEGRTGGANEIPASDAVY
DYVVFRGSDVKDLKIADESELEPQQAPKEEAEQVTQNESPAAAPVQVQPPAQPQQQSQPQ
AQPQVQEQAPRKARPEPRQEPREARESREQRQREPREPREPREPRETPAQPFDFSSNQIE
EFKKEMTEDEQTEKFYNKKSSFFDNISHSTREQQRDPEQNRVNRELNLETFGQTDSGFRH
NNFRGGRGGRGGGRGGRGRGGRGGRGGRGGDGMSNRDRETFGSFTGPAPRWN*

Neighborhood

Browse the locus neighborhood with JBrowse:

References

There are no reference.