YALI0D13772g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D13772g

Location

Species Yarrowia lipolytica Positions 1708266..1709995
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1730 (nuc.)
Previous locus YALI0D13750g Next locus YALI0D13794g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13772g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13772gYALI0D13772g_mRNA-001YALI0D13772g_CDS-001

Nucleotide sequence

 

>YALI0D13772g
TTCAGACCAACATCGACCCAGGCGGCTTGAGGAAGTCACGAGCACGTTGGAAACCGAAAG
CGGATTGTGAGTGTCGAGTAACACAGATGGATGAAAAAGTCGGAGCGCGAGTCGATCAGA
CTGAGGATCTACCAGAGATCCATTGAGTGATGCCTGAGTGTGGCGATAATGGGAGAGACC
GTGACAGACGTAGACACGGACACTGGCGTAGACATACACAAAGTGAAGTCACTGGAAACA
GGGACTGAGGCGAAGACTTGATCTGAACTCTGGTTCTGTGCTGCTGGATCACTATTAACA
CAGACTGACTTGTTACATAGAGTGTAGACCGACTAGACACGAACTTCTCGCCTCACACCA
CAATGCTCTCTCTACCTCCAGAATTGCTTCCACAGATCTTGGTGCACCTCTCATATCTCG
ATCTTCACTCTCTCAGTCTCACATGCTCGTTTCTGTACGACCAGGTGCACACCACCCTCG
AACATGATGATGCACTGTATCTCACGTGCAAGAACCTCGTTCCATGGATCCACCGACAGC
AGAAACCAAAATACTCACTATGGAAGGACATTCTCAACAGGATTCTGGACACTCAGTTCT
CGGGGGACCCCGTCAAACACATTGATACCTCCACATTGACCCCCACGCACCGCTTTGTGG
TGCCCAAACGACGCCCCAAGATGCACCAAAACACCCCGTTTGTGGGTGTGCCTCTGGTGA
AGGCACGATCTCCCGTTCATATCCACGAACTTGGTGTCAGCGTGGAGAACGGTCACTTTC
TGTTTGTCCACGATATCATCAACACAAGCCAGTACAGGTTGGATGTATCCTCCATGCATA
AACGAGACGTGAATGAAAAAGAGGCCCGAAACTACCTCGACTGGGGCTTCCCCCGGTTCA
TGAGAGAACCCTCGGGCTACAGATACAAGACTCCAGAGTTTGTGTGGAAGTTTGAACTAA
ATGGCGAGTTTCTCGATGACCTTTACGCACTAAACTGTGGATCCACACTCTTTGCGATTC
TCGTGGGCGTGCAATCTGGAGGGTTGTACTTTCTGAAGGTAGAATCCGAAGATCCACGTC
CCATTGTGCTCTTCTTGCCGTCGACAGAAACACACAACCCCATTCCTCCAAGAGCACAAC
TCCAGCAGACCAATGGAGCGGTGTTTGCTACCGTTTGCTACCCGGAGACAGAACAACCCG
AAATGATGTTTCTAGATTTTGATGGCAACGTTATAAACCGGCTCTTTGCAGTGTCGTCAC
GTGACCTCAATTGCGCGTTCATGGTGCGTGCCAGCGACTTGTTTCTGGTTCTGGGAGGCG
AGCTGGTGAGGGTGGCAGTTGATTTCAGCTCGGGAGGTGGAGCCGAGGTCGTGAGCCGGG
TGGGTCACGTGTCCGCTGGAAGAGGAGGAGAACACATGACTTCCAACTACGTGAGCTCGC
CGCGCTGTTATATGGTCTCGATCTCGTCTCTTTCATGTGACTCGCTGCGGTACCGGGCCC
ATCTGGATTTGGACAATCTATTTGGCAAGTATGCCATCTTCTGGAACCATGGCGGGTTTG
CAGCTCTGTTGGATCTGGAGAATCACGTGGTCACCAAGCTGCAGAACGATACCGATATGC
TGAGCCTTGTGTCGTGGGTGTGGTCCGGAGATGAGGGCAGGAGCTCTGGAAATGGACAGA
TTCATGTCTGTCGGTATACCATTGATTTTCTAAAGGGTTTGGAGGCTTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D13772g_CDS-001

Protein length: 456 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D13772g_CDS-001 MLSLPPELLPQILVHLSYLDLHSLSLTCSFLYDQVHTTLEHDDALYLTCKNLVPWIHRQQ
KPKYSLWKDILNRILDTQFSGDPVKHIDTSTLTPTHRFVVPKRRPKMHQNTPFVGVPLVK
ARSPVHIHELGVSVENGHFLFVHDIINTSQYRLDVSSMHKRDVNEKEARNYLDWGFPRFM
REPSGYRYKTPEFVWKFELNGEFLDDLYALNCGSTLFAILVGVQSGGLYFLKVESEDPRP
IVLFLPSTETHNPIPPRAQLQQTNGAVFATVCYPETEQPEMMFLDFDGNVINRLFAVSSR
DLNCAFMVRASDLFLVLGGELVRVAVDFSSGGGAEVVSRVGHVSAGRGGEHMTSNYVSSP
RCYMVSISSLSCDSLRYRAHLDLDNLFGKYAIFWNHGGFAALLDLENHVVTKLQNDTDML
SLVSWVWSGDEGRSSGNGQIHVCRYTIDFLKGLEA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG