YALI0D13068g

Overview

Description similar to uniprot|Q08004 Saccharomyces cerevisiae YLR074C BUD20 Protein involved in bud-site selection
Locus type CDS
Locus tag YALI0D13068g

Location

Species Yarrowia lipolytica Positions 1619489..1620257
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 769 (nuc.)
Previous locus YALI0D13046g Next locus YALI0D13090g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13068g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13068gYALI0D13068g_mRNA-001YALI0D13068g_CDS-001

Nucleotide sequence

 

>YALI0D13068g
ATGATGTACAAGACGAAACGTCGAACCCGAGATCTGGACCAGATTCTGCGGGACGACATG
AACACGTCGCAGTCGATCAAGGCTCTGCACAACCAGGAGTACGACGAGGAGAAGCCCGGA
CTGGCGCAGTTCTACTGTATTCCGTGCGCTCGGTATTTCGAAACCGAGTTTGCCAAACAG
ACACACATCCGGGGCAAGGTGCACAAACGACGGCTCAAGGAGATCCGCGAGGTGCCATAC
ACCCAGGAGGAGGCCAATATGGCTGCTGGAAACAATGTGGCGCGATACCTGGCTCGAAAT
GATGTTGATAAGAAGCGTCTGGATGAGGAGGAGGTGACCACCATGTTGACAGATCGTGGC
AGTCTTGAGGAGGTGGAGCAGGCCAAGGCGGCAAGCAGTTTTGCTCGTGAGCAGGAGGCG
TTGCGAATCGCCCGAGAAAAGGAGGCCGAGGAGGAGGACAAAGGGGTGATTCCCGAGACC
AAGGATGAGGATATGGCTTAGGAGGCTTAGAAAATCACAGGAATCTGAGCCTGCGAGGAT
TTGTGATGTTCGTTGGATGCTAGTCATTCGAAACAACTCAGTCATTCAGCCATTTTTCAC
GGCATTCACTAATCATTCATTCACAAATTACTCAATTCCATCTCTCTGGACCGAGGGATG
TAGCATGGGACTTAGAAATCACTCACTGCTGGATCAAATGGATTATGACAATAGCATTAT
TAACAGAAATGGATAGGCCATGATAGACAATATATTATTGATTACGATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D13068g_CDS-001

Protein length: 167 aa.
Product: C2H2-type zinc finger protein required for ribosome assembly, putative

>YALI0D13068g_CDS-001 MMYKTKRRTRDLDQILRDDMNTSQSIKALHNQEYDEEKPGLAQFYCIPCARYFETEFAKQ
THIRGKVHKRRLKEIREVPYTQEEANMAAGNNVARYLARNDVDKKRLDEEEVTTMLTDRG
SLEEVEQAKAASSFAREQEALRIAREKEAEEEDKGVIPETKDEDMA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG