YALI0D13090g

Overview

Description similar to uniprot|Q12017 Saccharomyces cerevisiae YOR281c PLP2 IAP-associated factor Viaf1
Locus type CDS
Locus tag YALI0D13090g

Location

Species Yarrowia lipolytica Positions 1622034..1623270
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1237 (nuc.)
Previous locus YALI0D13068g Next locus YALI0D13104g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13090g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13090gYALI0D13090g_mRNA-001YALI0D13090g_CDS-001

Nucleotide sequence

 

>YALI0D13090g
ATGATGAACGTGCAAGTGAACGAAGCGGAGGACACGGAATGGAACGACATTCTGCGGCAG
CATGGCGTGATTCCCGAGCGGCCCCCGTCGCCCACGTCGCAGATTGAGGCCGCTCTCGAA
GAGGCGATCCAGAAGCAGCACGACAACCGGTTGGAGGGTCTGGAGCTAGACGAGCTGGAT
GCTCTGGAGGACGACGAGGACGAGGCTTTTCTGGAGCAGTACAGGCTCAAGCGAATGGCC
GAGATCCGGTCGCTGGCGTCGCGGGAGCAGTATGGCTCAGTGGTGAAGATCTCCAAGCCC
GAGTATGTGGAGGAGATCACCGAGGCGAGCAAGAGAGACCCTAAGAATCCACATCTAAAG
AAGGCGACGAAGCAGCAGCCGGAAGAGGAGGCGGAACATGCGGACGCTCGCAACGCGATT
GTGGCCAGTGGCGATCCTCGTGATCAGGACGAGTCCGAGGGCACGTTTGTGTTTGTGCAC
ATTAGCCACGGGGGCGTTCCCGAGTCTCGGCTGTTGAGCGGGCTGTTTGACCGGGCTGCT
CAAAAGTTTCCGGACGTGAAGTTTGTTGACATTGACTCCAAGCAGATCAACGAAAAGTAC
TCGCTGGCGTCGGTGCCGACAATTCTGGTCTACTACAAGGGCAACCCCGTGAACCAGGTG
GTGGCGCTGGAAGGTATTGGTGGCAAGAGCACCAACATGGAGGATATTGAGGCATTTCTG
GTGAAGATGGGCGCGGTGCGGGCGAACGACAAGCGGCTGATTGTCAACCAGGACAAGGAC
GAGGATGAGCTGGAGAGACAGGGCAAGTCGATTTATTCGGGGGGACGAGGAGACCGAGAG
GAGAGTGATTACGATAGCGATTTTGATTAGCGACCACGGACGTGTATGACGGAAGATCAT
GAATGGACAGCACCCAATAGACCCTTGGGCCCGCAAAAGTGGTGAAGTCGTGGAGCCAAC
AGAAGCCGGGACGAACTGGGACATGACAAGAGCTATCTCAGCCCATCTCATGGGTTATGT
ATGGGCTGTGGGCTACCAGACGACTGACCTCGCTCACCATAGCACGTATAGATAATGAGA
TGTTCACGAGATGAGATGTTCACGAGATGAGATGTTCACGAGATGAGATGTTCACGAGAT
GTTGATGAGTCGGTGATAAGTTGACAGTGAGTGGACAGAAAAAAGAGGAAAAAAGTAAGA
GTTGCAACTGCCAAGAATCACATACATATTGGTCCAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D13090g_CDS-001

Protein length: 290 aa.
Product: Protein that interacts with the CCT complex to stimulate actin folding, putative

>YALI0D13090g_CDS-001 MMNVQVNEAEDTEWNDILRQHGVIPERPPSPTSQIEAALEEAIQKQHDNRLEGLELDELD
ALEDDEDEAFLEQYRLKRMAEIRSLASREQYGSVVKISKPEYVEEITEASKRDPKNPHLK
KATKQQPEEEAEHADARNAIVASGDPRDQDESEGTFVFVHISHGGVPESRLLSGLFDRAA
QKFPDVKFVDIDSKQINEKYSLASVPTILVYYKGNPVNQVVALEGIGGKSTNMEDIEAFL
VKMGAVRANDKRLIVNQDKDEDELERQGKSIYSGGRGDREESDYDSDFD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG