YALI0D13046g

Overview

Description similar to uniprot|P43558 Saccharomyces cerevisiae YFL044C OTU1 Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p
Locus type CDS
Locus tag YALI0D13046g

Location

Species Yarrowia lipolytica Positions 1616995..1618384
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1390 (nuc.)
Previous locus YALI0D13024g Next locus YALI0D13068g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13046g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13046gYALI0D13046g_mRNA-001YALI0D13046g_CDS-001

Nucleotide sequence

 

>YALI0D13046g
ATGAAACTGAAACTACGAACGCCCACGCTCAACAAGGTGGTTGAGCTCGACAACGACGCC
ACCGTGGAGGACCTGGCCGCCATGGTGCTGTCGCTAGGAGTGGTGGATTTTGCCATCAAG
GGCGGGTTTCCGCCGAAGCCCATCGATCTGTCGCAGGGAAGCAAGAGCCTGGCGTCGGCG
GGGATCCGGAACGGCGACCAGCTCATTGTGTCGACGTCCGGTGGCGAAATCACCAAGGGC
AACGACATTGTCTCTGCCAACCGGGGACACAAAGATCCGGTGATGGGTGGGTTCAACAAG
GGCTCCGGGACAAGCTCCGGCTCGGGTGGCTCAGGACCTTCCGATCTGGTCACAGCCCCC
TGTGGCACCCGTAAACTCGTGCTTCGAGTCATGGAAGACGACAACTCGTGCATGTTCCGA
GCAGTGGGATACAACATGATGAAGGACGCAGACACAATGTTCGAGCTGCGGATGATGGTC
AAGGACAAGATTGCGTCGGACCCGGAAACATATTCCGACGCAATTCTGGGCCGCCCCCGC
GCAGAGTACATGAGCTGGATCACCAGGCAGGACTCGTGGGGAGGAGCCATCGAGCTGCAG
ATTCTGGCGGAGAACCTGGGTCTGACCATCATTTCGGCCGACGTGTCGACAGGCCGACTG
GACCACTTCAACCCCGGCAAGCCCACGTTCTGCATCGTCGTCTACTCGGGCATCCATTAC
GATAGTGTGGCGCTGGCGGAGGTATCCGACCTGTACACCAATTCGTCCGACGTGACGGTG
TTCAGTCAGGACGCCCAGGGAGCGGCGGTACTCGAGTCGCTCAAGGTGCTCATGGCGGAA
TTGAAGAAGAAACATTATTATACCGACACTGCTAGTTTTGCTGTCAAGTGCAATGATTGT
GGATCGACGTTTACCGGAGAAAAGGGGGCGTTGGAGCATGCCAAGAAGACGGGTCATACC
AATTTTGGCGAGAAGTGACGACGGCTCGTCTACGGCAAATGTGAGTCCATCATGAGAGCT
TCAGCTGGTCCACCTTGAGTGACTTCAGCAAGACTGTGGAGCTCTGTCTCCTTTGCACCT
ACAACCGTGTCGAAGAATCACTCTACTGATACCACCTTCCACTGTCTGAGTTTCATAGGT
CTCTATGGACTATATGGAACCAACATGGTGTACAGTGTTTGTATAATGCCGGTAGCAGTG
CCGTTGACAGAGATCTATGATGGGAGTGGAATGATTGGGACAGACAACTCAATCGATACG
GTTATCATATATCTATATTTGATGTTGCCTAACTGTCTGGTGGCCATAGTCTAGAGTAAC
ACATACGTGTACTGGACAGAACATACTACAAGTAGTAGAAAACAATGGAGACATTTTATG
GAAAATCTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D13046g_CDS-001

Protein length: 326 aa.
Product: Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, putative

>YALI0D13046g_CDS-001 MKLKLRTPTLNKVVELDNDATVEDLAAMVLSLGVVDFAIKGGFPPKPIDLSQGSKSLASA
GIRNGDQLIVSTSGGEITKGNDIVSANRGHKDPVMGGFNKGSGTSSGSGGSGPSDLVTAP
CGTRKLVLRVMEDDNSCMFRAVGYNMMKDADTMFELRMMVKDKIASDPETYSDAILGRPR
AEYMSWITRQDSWGGAIELQILAENLGLTIISADVSTGRLDHFNPGKPTFCIVVYSGIHY
DSVALAEVSDLYTNSSDVTVFSQDAQGAAVLESLKVLMAELKKKHYYTDTASFAVKCNDC
GSTFTGEKGALEHAKKTGHTNFGEK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG