YALI0D12925g

Overview

Description some similarities with uniprot|P38888 Saccharomyces cerevisiae YHR204w HTM1
Locus type CDS
Locus tag YALI0D12925g

Location

Species Yarrowia lipolytica Positions 1604380..1606499
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2120 (nuc.)
Previous locus YALI0D12903g Next locus YALI0D12947g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12925g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12925gYALI0D12925g_mRNA-001YALI0D12925g_CDS-001

Nucleotide sequence

 

>YALI0D12925g
ATGAAATGGTGGCTTCTGACGCCGGTTCTGGCGTTTGATTTCAGCCGTGGGTCGCTCCAT
GCGCTGCGCAACGAGAGCGAGACGCTCTTCGACCACGCCTACAATTCCTACATGCTCCAT
GGGTTCCCGCATGACGAGGTTCGACCAATTGCATGCGAGGGGGTCACGCGAGACAAGGAC
GAGACGAATCTGGGTCGCAACGATCTTATGGGCGGGTGGCCGGTGACTCTTATCGACACG
CTGGACACGCTGGCGGTGATGGGCCGCAAAGCCGAGTTCGAACAGGGCGTTTCGCAGGTT
CTGCAACACGTCAAGAACTTTGACTACGACGCCACGGTGCAGGTGTTTGAAACGACCATC
AGAACATTGGGAGGTCTTCTGGCGGCTCATACGTACGCCTCATCACCGGACCTGGGCATG
CAGATACAAAACTACGGCGGAGAACTGCTAACTCTGGCGACAGATCTGGGAGATCGACTG
CTGTTGGCGTTCGAAGGGGTCGATCATGGAATCCCGCACCCTCGAGTCAACTTGCGACGA
GGTATCAGACCGGTGGGAGGCAAGTACATCACCGACGCCTGTGCAGCCGGAGGAGGGTCT
TTGCTGCTCGAGTTTGGACTACTGTCAAAGCTGACTCGAGACCCAAAATACATTGATGCG
GCGGAGAAATCCTTCTTCGCCATCTGGGAACTGCGATCGGACAGAGACCTGCTTCCTATG
GGCATAGACCAGGACACACTGCGCATTACCTCGGCCATGAGCGGGGTCGGCGCCTCGGCA
GACTCCTACTACGAGTATGCCCTCAAGTGGTACCTCATGTCTGGAGACGAGCGGTTCTGG
GAGGTGTACTCGCGATCAAGACGGGCCATCGATACCTGGAACACCCATCCGGACACATGG
CATCATTACAATGTGCACTATGTGACTGGCGAAGGCGTGGCGCCCTGGATCGATTCTCTC
AGTGCCTTCTTCCCTACTCTGGACGTGCTTACCGGCAATCTCAAGCGGGCCATCAGGACC
CATCTCACCCATATGAAGCTGTGGAACACTTATGCCGGCATTCCTGAACGCTGGCGGTTC
ACAGACGCCCAGGTCGATCTGGAGTGGTACCCTCTACGGCCCGAGCTCATAGAGTCGACT
TACTACCTCTACCGAGCTACCCGAGACGTCTTCTATCTGCAATGTGGACGTAAGATCATG
TCCGATCTCAATCTGCGTAACAAGGTGGAATGTGGGTATGCAGGCACCCAGAACGTCAAG
ACCGGCGAACTGGCGGACCGGATGGAGTCGTTTTTCATGTCTGAAACTGCAAAGTATCTC
TACCTGCTGTTTGACACCGACAACGGCCTCAACAACGACTCGCGACAGTTCATCTGGAGC
ACCGAGGGCCATCCTCTTTACTTTGACGATAGGGTGCTTTCCAATTCGTACTCTGAGAAG
CTCCCTCGTGAGCCCTCCAAGGGTCTGGAAGACGTGAATGGTACGGCTCTCATCTGTCCC
AAATTCAACCATCCCACAGGCCCCTTTTCTCTCATAGGCGCATGGCCACACATGTACGAT
CTCAATGCTCGGTATAAGTACGAGAAGCCCTGGTATCTGCGTCCCATTCTAAACCGGCCG
TGGTCGACTCTGCTGCGAAAGCTCCGAAACGACGGCACGTCAGTCGTCAAAAAGGGCATG
ATGGCAGATGCTGAAATGGAGCCTGGGTTCTACGAGCGCTATGTGGCTGGCACCAGACCC
ACATGCGCCGCCATTCTCGACGGAGACATGCATGACGTGTCGTTTGGAAGCGACACCACC
AGTGTTTATCCCCCGCTGTACCAGGAGCCCGATTCCAAGACGGGCTATCTGGAGTTTGAG
TCTCTGGATGGAGTCAAGTTGACGCTTGTGGCGCGCGACAATCACTTTTGGCTGCTCAAC
ATCAATGGAGTGGGCTGTTCCGGAGCCAACGTGGACTGGTATTACAATGTGCCCAACAAC
GTGATCAACATCAACAAGGCTACCGGCCTGTTGAACTTTCGGGGTCGCGATGTGCCCAAC
ATCAAAATCGGCAAGATCATTTCGTGATTCTTACGGTGCCGTGGCGACTGATGCCGTGAA
TGTATTTATTGTTTATTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12925g_CDS-001

Protein length: 689 aa.
Product: Conserved hypothetical protein

>YALI0D12925g_CDS-001 MKWWLLTPVLAFDFSRGSLHALRNESETLFDHAYNSYMLHGFPHDEVRPIACEGVTRDKD
ETNLGRNDLMGGWPVTLIDTLDTLAVMGRKAEFEQGVSQVLQHVKNFDYDATVQVFETTI
RTLGGLLAAHTYASSPDLGMQIQNYGGELLTLATDLGDRLLLAFEGVDHGIPHPRVNLRR
GIRPVGGKYITDACAAGGGSLLLEFGLLSKLTRDPKYIDAAEKSFFAIWELRSDRDLLPM
GIDQDTLRITSAMSGVGASADSYYEYALKWYLMSGDERFWEVYSRSRRAIDTWNTHPDTW
HHYNVHYVTGEGVAPWIDSLSAFFPTLDVLTGNLKRAIRTHLTHMKLWNTYAGIPERWRF
TDAQVDLEWYPLRPELIESTYYLYRATRDVFYLQCGRKIMSDLNLRNKVECGYAGTQNVK
TGELADRMESFFMSETAKYLYLLFDTDNGLNNDSRQFIWSTEGHPLYFDDRVLSNSYSEK
LPREPSKGLEDVNGTALICPKFNHPTGPFSLIGAWPHMYDLNARYKYEKPWYLRPILNRP
WSTLLRKLRNDGTSVVKKGMMADAEMEPGFYERYVAGTRPTCAAILDGDMHDVSFGSDTT
SVYPPLYQEPDSKTGYLEFESLDGVKLTLVARDNHFWLLNINGVGCSGANVDWYYNVPNN
VININKATGLLNFRGRDVPNIKIGKIIS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG