YALI0D12903g - RPS4, RPS7

Overview

Description uniprot|O59950 Yarrowia lipolytica YALI0D12903g RPS4/RPS7 Ribosomal 40S subunit protein S4 (S7)
Locus type CDS
Gene names RPS4, RPS7
Locus tag YALI0D12903g

Location

Species Yarrowia lipolytica Positions 1601763..1602797
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1035 (nuc.)
Previous locus YALI0D12881g Next locus YALI0D12925g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12903g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12903gYALI0D12903g_mRNA-001YALI0D12903g_CDS-001

Nucleotide sequence

 

>YALI0D12903g
ATGGCCCGAGGACCGTGAGTATCCCCCACCCCCCGATCAGATGAGGCACAGACCAGGCTA
GCCCATCGCTTTTAGAAGAAGGATAAGGGCTGTTCTGGGTGTGTCAAGAGGAGATGATGA
CGAGAAGCAAAGAGCTTCGACTCAGTCGCCTCTGCCCCACGAACTAAACTAACGCCAGCA
AGAAGCATCTCAAGCGACTCGCAGCTCCCTCCCACTGGATGCTGGACAAGCTGTCCGGCA
CCTACGCTCCCCGATCGTCTGCCGGTCCCCACAAGCTGCGAGAGTCTCTGCCTCTCGTCA
TCTTCCTGCGAAACCGTCTCAAGTACGCCCTGAACGGCCGAGAGGTTAACGCCATTCTCA
TGCAGCGACTGGTCAAGGTCGACGGCAAGGTCCGAACCGACTCCACTTTCCCCGCTGGCT
TCATGGATGTCATCCAGCTCGAGAAGACCGGCGAGAACTTCCGACTTGTCTACGACGTCA
AGGGCCGATTTGCCGTCCACCGAATCACCGATGAGGAGGCTGCTTACAAGCTCGGCAAGG
TCAAGCGAGTCCAGGTTGGCAAGAAGGGTATCCCCTACCTCGTCACCCACGACGGCCGAA
CCATCCGGTACCCCGACCCTCTCATCAAGGTCAACGACACCGTCAAGATCGACCTGGCCA
CCGGCAAGATCACCTCTTTCGTCAAGTTTGAGAACGGTAACATTGTCATGACCACCGGAG
GTCGAAACATGGGCCGAGTCGGCACCATCACCCACCGAGAGCGACATGAGGGTGGCTTCG
ATATCGTCCACATCAAGGACGCTCTTGACAACCAGTTTGTTACCCGACTCACTAACGTTT
TCGTTATCGGTGAGGGCAACAAGTCTCTCATCTCTCTGCCCAAGGGCAAGGGTATCAAGC
TCTCCATTGCTGAGGAGCGAGATGCCCGACGAGCCAAGCAGGAGTAAGTTCAGATTGAAC
ACATTGTTTAGCTAAAAAAAAGATTCATGTATAGCATGTTGTATTTATGAACGAGGAACG
CGAGTGAATCGAGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12903g_CDS-001

Protein length: 261 aa.
Product: Ribosomal 40S subunit protein S4 (S7)
Gene: RPS4, RPS7

>YALI0D12903g_CDS-001 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRSSAGPHKLRESLPLVIFLRNRLKYALNGRE
VNAILMQRLVKVDGKVRTDSTFPAGFMDVIQLEKTGENFRLVYDVKGRFAVHRITDEEAA
YKLGKVKRVQVGKKGIPYLVTHDGRTIRYPDPLIKVNDTVKIDLATGKITSFVKFENGNI
VMTTGGRNMGRVGTITHRERHEGGFDIVHIKDALDNQFVTRLTNVFVIGEGNKSLISLPK
GKGIKLSIAEERDARRAKQE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG