YALI0D12947g

Overview

Description weakly similar to uniprot|Q04746 Saccharomyces cerevisiae YMR065w KAR5 nuclear fusion protein
Locus type CDS
Locus tag YALI0D12947g

Location

Species Yarrowia lipolytica Positions 1608296..1609519
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1224 (nuc.)
Previous locus YALI0D12925g Next locus YALI0D12969g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12947g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12947gYALI0D12947g_mRNA-001YALI0D12947g_CDS-001

Nucleotide sequence

 

>YALI0D12947g
ATGTCCCTATCGTACTCGTTCAACACCACCATCTTCACTGAGAATCGCGACCTGGTCGCA
GCCCTCCAACCTCAAACCAACTGCGCTCGAACCGCTCTGACTCTCATCGTGTCGGATTGT
GGCAAATTATCCTCTTTCAACGAAGACCAGCAATTGCGAGTGTCGCTGGCGGTGGGCCTG
GCGGTTTGCGAATTCAAGGCGGCCCAGGTGACATACCCAGACGCATGTAACAACATTGAA
GACTGGATGTCGACATCGGCCTGCACACAACAACTCGTGTCGTCGCCTCAGTGGTGGACC
ACCTACCACGGATGCTACAACTCCGTCAAACAGATCTGCCACATGCACGAGGCCAGCCGA
GAATGCGACCGCGCGCTAAAAACCCACAGCCAGATTGTCGACATGCAAGAAAAATTGCAC
ACCAAGATGGACCAGTACTGGGAACTGGTAGAAACCATGTCGGATCACAGAGACGCGGTG
CTGGATTACTGGAACGACACGTTTGACTTTATGAGCGAGACTCTCGCCCACATGAAGGAA
ACCTCGGTGTCCCTGAATGCCGTCTACAGAGATAACTTTGCTCAGGCACAGGAGCACTTC
CAGATGCTGTCAGAAAATCTACAGGAGGCAAGGGTACAAATGGAAAACCTCGGGTGGGCC
GCCCAGGATGCAGTCGTCTCGTTGTCCAAGTCTACACTCGCAGAACAATCTCTGGTGTCG
GAAAGACTCAAGAATGACGCCTCCAGCTTACACAAACTGTTGGTACTGGCACACCAAGAC
ACCACAGAGAGCTTTGAGACCCAGCTGCAACAGTCACTCACAATACTAGTTGAGTCTAGC
GACAATGTGCTTCTCAACCATGTGCAGCAAGTAAGTTCACGACTGTCTGCTCTCATGTCC
GACCTCGAAGAGAGCCAGAAGAAGAACATGGATATGCAACATCAGCTGCAGCAAAAGGTG
AGAACGATCAACGATGACATCGAGGGATTCACAGACACGGTTAAGCAGGGGCTGGAGGCT
AGCCACTCGCTTCTGAACCTGGTCAAGTCGAAAATCCAACTCGTCAACGGCGTCGTGAGC
ATTTTCAGTCGACCTGTCAGGAGTGCATTCCAACTGGCCAGCTTCATCATCATGATCAGA
GCGGCATTCATCGGAGGAATCTATACCAGTATCGGGTTGGTGATGGGGAGTATGCTTGGT
GTTCTTGTTATGCAGCAGGTGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12947g_CDS-001

Protein length: 408 aa.
Product: Conserved hypothetical protein

>YALI0D12947g_CDS-001 MSLSYSFNTTIFTENRDLVAALQPQTNCARTALTLIVSDCGKLSSFNEDQQLRVSLAVGL
AVCEFKAAQVTYPDACNNIEDWMSTSACTQQLVSSPQWWTTYHGCYNSVKQICHMHEASR
ECDRALKTHSQIVDMQEKLHTKMDQYWELVETMSDHRDAVLDYWNDTFDFMSETLAHMKE
TSVSLNAVYRDNFAQAQEHFQMLSENLQEARVQMENLGWAAQDAVVSLSKSTLAEQSLVS
ERLKNDASSLHKLLVLAHQDTTESFETQLQQSLTILVESSDNVLLNHVQQVSSRLSALMS
DLEESQKKNMDMQHQLQQKVRTINDDIEGFTDTVKQGLEASHSLLNLVKSKIQLVNGVVS
IFSRPVRSAFQLASFIIMIRAAFIGGIYTSIGLVMGSMLGVLVMQQV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG