YALI0D12881g

Overview

Description similar to uniprot|O94257 Schizosaccharomyces pombe Conserved hypothetical protein
Locus type CDS
Locus tag YALI0D12881g

Location

Species Yarrowia lipolytica Positions 1599562..1600569
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1008 (nuc.)
Previous locus YALI0D12859g Next locus YALI0D12903g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12881g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12881gYALI0D12881g_mRNA-001YALI0D12881g_CDS-001

Nucleotide sequence

 

>YALI0D12881g
ATGAATCTGCGCAAAGATAAAGTGGTACAGTCTACCGACGGAGACGCGCTGTCGTCCAAG
TACTCGGCGGTGCAGAAAGGGTACCTGCAGGACGAGTTCATCGATCTGTTTGTGGCTGGT
TCCAAGCAGGCGGCCGCTCAACAAGGCCCCGGGTCTGCTCGCAAGGTGGTGGCTCAATTC
CAGCCGAAATTACCGCTCATCAACCGTGGCACCTTTGTGCGACACCACGCGATCGACGTA
CTGGTCGACCGGTTTCTGGCCGCCAAAAAACCGGGCCAGAGAGTCCAGATCATTTCTCTG
GGCGCTGGATCGGACACGAGGCCATTCAGTCTATGGAGCAGCAAGCCCGAAAACAGAGAC
GAGATTCTGTACCACGAGATTGATTTCGCCGTGTCCGTCGAGCGAAAAAGAGACATTATC
ATGCAGGATTCGACCTTGAGGGAGTTGGTGGGCGCGCAAGAGTACGACAAGACAACCGGC
ATGCACACACAAAGATACCACCTGCACGGAATAGATCTCCGTTCAATCGGCCCAGGCTTT
GTGTTGCCAGGATCAGACCCCAGTCTTGCGACTCTGATCATCAGTGAATGCTGTCTATGC
TACCTCGAGCCGGACCAGGCCAAACAGGTCATTTTCTGGATCACCAGCGAGTTTACCAAC
TCCACCATCGTCATGTACGAGCCGCTGTCGGGCCAGGACCAGTTTGGGCAGGTCATGATC
GAAAACCTGGCTTCCAGAGGCATTTCTATCCCTAGCATGACCAAGTTCCCGTCTCTGGAG
TCTCAGATTGAGCGGTTCAAGGCAGCAGGGTACACCGAGGTGCTGGCCACATCGATGGAC
GTGATCCACGACGAGTGGCTGAGTCCCGAGGAGCAGCAGCGCATTCATGGGCTCGAGTTT
CTGGACGAGCGAGAAGAGCTGCTCTTGTTGCTCAAACATTACTGTGTGGTCTGGGCCAGT
AATCTGACAAAGTAGGGACGTGTACTTGTAATTTATTTATTGACCGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12881g_CDS-001

Protein length: 325 aa.
Product: Conserved hypothetical protein

>YALI0D12881g_CDS-001 MNLRKDKVVQSTDGDALSSKYSAVQKGYLQDEFIDLFVAGSKQAAAQQGPGSARKVVAQF
QPKLPLINRGTFVRHHAIDVLVDRFLAAKKPGQRVQIISLGAGSDTRPFSLWSSKPENRD
EILYHEIDFAVSVERKRDIIMQDSTLRELVGAQEYDKTTGMHTQRYHLHGIDLRSIGPGF
VLPGSDPSLATLIISECCLCYLEPDQAKQVIFWITSEFTNSTIVMYEPLSGQDQFGQVMI
ENLASRGISIPSMTKFPSLESQIERFKAAGYTEVLATSMDVIHDEWLSPEEQQRIHGLEF
LDEREELLLLLKHYCVVWASNLTK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG