YALI0D12859g

Overview

Description weakly similar to uniprot|Q8C1X3 Mus musculus Hypothetical S-adenosyl-L-methionine-dependent methyltransferases structure containing protein
Locus type CDS
Locus tag YALI0D12859g

Location

Species Yarrowia lipolytica Positions 1597988..1599549
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1562 (nuc.)
Previous locus YALI0D12837g Next locus YALI0D12881g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12859g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12859gYALI0D12859g_mRNA-001YALI0D12859g_CDS-001

Nucleotide sequence

 

>YALI0D12859g
ATGCTCAGAACAATCAGACCCGCCAGAACAACACTCGTGAGGGCGGTGAGACCGGTGAGA
CCGGTGAGCGGCCGCGTCGGCAGATTGGGTCGTCACGTGACCACAGGCACCACCTCTTCC
ACAACCTCCGCTTCGTCGCCGGATCTTTCCACAACGCTGGCCATGGCGATTGAGCAACAG
GGCCCAATGTCGGTGGCCACCTTCATGAAGCACTGTCTGACGAACCCCTCGGGCGGCTAT
TACATTGACAAGGACCCGCTAGGAGCCAAGGGTGACTTCACCACGTCGCCCGAGATTTCT
CAAATGTTTGGCGAGCTCGTGGGCCTGTGGTTGGCTGCCCAGTGGCTGTACTACGGCCAG
AAACAGCCCTTCCGAGTGATTGAGTACGGTCCCGGCCGAGGAACGCTCATGGACGACAGC
CTACGGGCCCTGGTGTCTGCCAAAAGCACTGGAGCCAAGGAGGCGCTCAAGGAGGTGCTG
CTGGTGGAGGCGTCTCCGGTGCTGAGAGACGCGCAGAGAAAGAAGCTGTGTGGAGCCGAG
TCGCAGTTCAAGACCGAAGAAGACGGCTCCATCACGTGTGTGACCAAGTACGGCGTGCCG
ATCCGGTGGTACGAGGACTCCAAGATGCTGGACAAGCTGGCGTCTTCAAACGACCCGCTG
CACAATTACATTGTGGCCCACGAGTTCTTCGACGCCCTGCCCATCTACCAGTTTGAAAAG
ACAGACAAGGGATGGCGCGAGCTCATGGTCAACTACGGCGTGGAAAACAAAACCAAGGAG
TCGTCGATTCTGCTGCCCGGACAGACCCACATCAAGTCGTCTGATCTGGATAAGGACAAA
AAGAAAACGTTCCATCTGGTGACCGCGCCCACTTGGACAGTGGCCTCCAAGGTCATTCCC
CAGAGCCACAAGCGGTACCGGGATCTGCCCGAGTGGTCCAAGATCGAGGTGTGTCCCGAT
GCCTGGGATGTGGCCAACCAAATGGGCCGACTGGTGGCCAAGGGAGGAGCTGCCTTCATT
GTCGACTACGCAGTCAAGCCCGGAGTGCCCGTAAACACTCTGCGAGGAATCAGAGACCAC
AAGATCTGCTCGCCGTTCGAGGAGCCGGGTAAGGTGGATCTTTCTGCCGACGTGGACTTC
ACCGCCATCGGAATTGCATCCCGATCCAAGAACAAGGAGAATGTGTCTGCCTTTGGACCC
ATCAACCAGGCCACCTGGCTCAAGAACATGGGCATCGAAATGCGGACCGAGAAGCTCATG
GAGGGCAAGGAGGAGTACATCAAGAAGCGGATCGAGTCGCAATACAAGCGGCTGGTGGAC
ATTGGAATCAACGGTATGGGCAAGATTTACAAGGCCTTCTTTTTGACCCATTCCAGCCAC
GGATATCCCGTGGGATTCCCTATTCCCGAGCCCAAAGATCTCAAGGAGCCCCATCAGAAA
CCCGAAAAGGACCCCAAGGACACTGAGCCCAAGGTTGTTGAGGTCTAGACGCAAGTGTCT
CTCCAACTGGTGAGTTGTATATATATAGTTAGATGAATGATGAGAATAGTATCGAGTATT
GT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12859g_CDS-001

Protein length: 496 aa.
Product: Conserved hypothetical protein

>YALI0D12859g_CDS-001 MLRTIRPARTTLVRAVRPVRPVSGRVGRLGRHVTTGTTSSTTSASSPDLSTTLAMAIEQQ
GPMSVATFMKHCLTNPSGGYYIDKDPLGAKGDFTTSPEISQMFGELVGLWLAAQWLYYGQ
KQPFRVIEYGPGRGTLMDDSLRALVSAKSTGAKEALKEVLLVEASPVLRDAQRKKLCGAE
SQFKTEEDGSITCVTKYGVPIRWYEDSKMLDKLASSNDPLHNYIVAHEFFDALPIYQFEK
TDKGWRELMVNYGVENKTKESSILLPGQTHIKSSDLDKDKKKTFHLVTAPTWTVASKVIP
QSHKRYRDLPEWSKIEVCPDAWDVANQMGRLVAKGGAAFIVDYAVKPGVPVNTLRGIRDH
KICSPFEEPGKVDLSADVDFTAIGIASRSKNKENVSAFGPINQATWLKNMGIEMRTEKLM
EGKEEYIKKRIESQYKRLVDIGINGMGKIYKAFFLTHSSHGYPVGFPIPEPKDLKEPHQK
PEKDPKDTEPKVVEV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG