YALI0D12727g

Overview

Description weakly similar to uniprot|Q04600 Saccharomyces cerevisiae YDR117c
Locus type CDS
Locus tag YALI0D12727g

Location

Species Yarrowia lipolytica Positions 1589855..1591851
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1997 (nuc.)
Previous locus YALI0D12705g Next locus YALI0D12749g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12727g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12727gYALI0D12727g_mRNA-001YALI0D12727g_CDS-001

Nucleotide sequence

 

>YALI0D12727g
ATGTTCCAAAAGAAACCTACAGTGAGTACCACACGGCACCAATTCGCGACGCACACCCCC
ACACACCCCGCTCTAACCAGATCAACCCCCCAAACTCGGTCAAATCAAGCCAGAGATCCA
AACTGCTACAGGATCTCTGTGTCGCCCACAATCTTGACTACGCCCGCCTGTCGACCGCAG
GCAAGGAAAACCTGCTGCCCAAGAATGTGCGCACGTGCAAGTTCCAGGCCCACACCGGCG
AGAAGGGCATCATGTACATTGATCTCGACGGAGCGCCCCTGTGGTTCACCATCAGATCCG
CCAAGGACAAGACGGACCTCATGATCCCGACCGTTTTCACCCTGTGGAAGGCACCGTACC
TGCTGCCCCGCATTGCCACGTGGAAACCCGTGCTTGCCAAGCTCATGGGAGGTGCAGATC
TCATGTTGCCAGGAACCGTGCCTCCTTTCCCCCAGGACGCACGAAAGGGAGCCCTGGTGG
CTGTCGTGGACGCCGAGAACCCCACTGTGCCTCTGGGCGTGGGCCAGTGCATTCTGCCGC
TGTTCGAGATTGAGGTTGTTCGTGGACGGACAGGAAAGGCTGTGCTGATGGACACGGTGG
TCGAGGATGAGATCTTCCATCTAGGTAAGCATGAGGTCCAGATCCCCACAGATCTCACCG
AACAGATGGAGATTCCGTATGAGGAGGAGACCACCGAGGGCCAACCTGCTTCTGAGGGTA
CTACTGAGCCCCCAGAGTCAACTGGAGCTGTCAAACACCCTGAAATCACAGTCAAGGTTG
AAGAGGAAGATCTAAATGACAGATTCTCTCGTGAAGCTACTCCCGGCCCCGAAGAAATTA
ATCAGATATCTGAGCAGATGGAGGAGACGAAACTGGAAGGTACAACGTCTGCAGAGACCC
CTGTTGCTGAGTCTCCTGCTGAGTCTTCTGAACCCGCGCTCACCACGGAAGATATCGACC
ATGCGTTCAAGCGGGCGCTCATGCAGTCGCTGTACAAGATCTCCAAGGCTCCCATCGACC
TACCTATCCCTTCATCCACGTTCATGTCCGAATACGTGCTCAACAATCTCCCCATCTACC
ATCCCAATGTGAACATCAAAAAGACGTCGTGGAAGAAGGCCTCCAAGTTCCTCAAGACCA
TGGAGAAGGAGAAACTCATGAAGGTGAAGGAAAAGGGCGGTGATGTGTCTATCATCAGTC
TGGCAGGGTCAGACAACGAGGCCATTGCCCGATTCGAGCCCTTCAAGGTCGCCAAGAAGC
GTGCTGATAAAAAGACCGACTCCGCCGACAATAATTCATCTTCTGGAACCACTCTCACAG
TGACGCAGTTCTGGAAACCCAAATCGGCAGCTGGTGACTTTTTCAAAGCCATGGGACAGC
CCATGAGCGCCTACTACCAGGGTTCCGAGCTTACCAAGCTGCTCCAGGAGTACATTGCCA
AAGAGAAGATTGCAGACCCCAAGAAACCCAAGAACGTGGTCATCGACTACACTTTGAGAG
CGTCCTTAGGCGGAGTGGGCCAGCAAACCAGTGTGCCTAGAGCCAATCTTACCCAGATGC
TACAGATGAACTGCCAGCCCTTCCATACCGTCTCTAAGGACGGCGAGGAGCCCACTTCTG
TCCCTCTTCAAAAGGGACTGCCTCCAAACATCACAGTCACTCAGGAGAAGCGAAACAGAA
ACAAAATGGCCACTGTTATCACCGGATTGGAGCACTTCAGGATCGACATGTACTCTCTGG
CCGACGACCTCAAAATCGCCTGTGCCGGCTCAGCCACCATTACCCCCATTAAGGAGGGCT
CTCCCGAAATGGAGGTCATGGTCCAGGGGCCCCAGTATGACAATGTCACCAATCTGTTGG
TGAAGCGAGGCGTCAAGCCCCAGTGGATCCAAAAGAAGGATGGCAAAGGTAAGCCCAAGA
AGAAGTGACTGATATACGCACGCCACAGTACAAGTACATACTACTACGTAAAAACACTAT
TCTATTATCGTATAAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12727g_CDS-001

Protein length: 623 aa.
Product: Conserved hypothetical protein

>YALI0D12727g_CDS-001 MFQKKPTINPPNSVKSSQRSKLLQDLCVAHNLDYARLSTAGKENLLPKNVRTCKFQAHTG
EKGIMYIDLDGAPLWFTIRSAKDKTDLMIPTVFTLWKAPYLLPRIATWKPVLAKLMGGAD
LMLPGTVPPFPQDARKGALVAVVDAENPTVPLGVGQCILPLFEIEVVRGRTGKAVLMDTV
VEDEIFHLGKHEVQIPTDLTEQMEIPYEEETTEGQPASEGTTEPPESTGAVKHPEITVKV
EEEDLNDRFSREATPGPEEINQISEQMEETKLEGTTSAETPVAESPAESSEPALTTEDID
HAFKRALMQSLYKISKAPIDLPIPSSTFMSEYVLNNLPIYHPNVNIKKTSWKKASKFLKT
MEKEKLMKVKEKGGDVSIISLAGSDNEAIARFEPFKVAKKRADKKTDSADNNSSSGTTLT
VTQFWKPKSAAGDFFKAMGQPMSAYYQGSELTKLLQEYIAKEKIADPKKPKNVVIDYTLR
ASLGGVGQQTSVPRANLTQMLQMNCQPFHTVSKDGEEPTSVPLQKGLPPNITVTQEKRNR
NKMATVITGLEHFRIDMYSLADDLKIACAGSATITPIKEGSPEMEVMVQGPQYDNVTNLL
VKRGVKPQWIQKKDGKGKPKKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG