YALI0D12705g

Overview

Description weakly similar to uniprot|B6K1S4 Schizosaccharomyces japonicus anaphase-promoting complex subunit 4
Locus type CDS
Locus tag YALI0D12705g

Location

Species Yarrowia lipolytica Positions 1587279..1589426
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2148 (nuc.)
Previous locus YALI0D12683g Next locus YALI0D12727g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12705g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12705gYALI0D12705g_mRNA-001YALI0D12705g_CDS-001

Nucleotide sequence

 

>YALI0D12705g
ATGACACAAGGCAAGGCGTTCGAGCCGTTGCACAATGGCGTCCTGCCTGCGAAAACCAAC
CCGGATCTCACCTCCTGGTGTCCCACCATGGATCTGGTGGCGTTTGCAGACAGCTCTGGA
GCCATGCTGTTTGTCTACCGAATGAACGCGCAGTTGATCTGGAAACACAAACAGCCGTTG
GCGTCGGCAAACATCTCCAACCTGTCGTGGAGCAAGGACGGCCGACTGCTGGCCATTGGC
TACTCGGACGGCACTTGCAACGTCCACGACTCAAACACAGGCAAGCTGATCCACCATGTC
ATCATTCCAGCCGGCTCCGAAACGACCCAGCCGTCGGACCTGTCGTGTGTCAAGTGGATC
AACCAGTCGCTGAAGGTCCAGCAGCAACCGACGGCTGTCCCGGAGGCCCAGCGGCTCTTT
GACAAGTTTCTCGACCTCGACGCCTTCTACCAGTTCCCCAAGCTGTCGTCTCTCGCATCT
TCCAAGGCGTCCGTCTTCTCGTCACGATTCGCAATTGAACAGATGATCCAGGTGGCCCGC
AAACTAGATGGCGACATCATCACCGAGGGCAGTGTTAACCCTGAAAAAAATACGCTCCAA
AAGGGAGGACCAGTCACCCAGGACATGGACATTTTGTGCTCAGTCACCAAACAGGGCTTT
CTGCGGTTCGACCTCTTTGGACTCTTCACAGTCGACAATATTGAGCTCGGAGTCGCCCAC
GATACTCTTCGAATTGGCCACAGAGCAACCTCGCCCACATACCACATTATCATGCAAAAA
GGAGACCAGCTCACTTATCTGCCCATCGAGCTCAAATTCCTGCAAAAGTTTGGCACCTAC
CTCGTCGACGTGGCGCTTACTAGCAGTCGTATCCTGGCGCTTCTGGGATACATGAGGGAG
TCTTTTGAGCTGCTCCAGACTGAAATGGCTGCCTCTCAAAAACTCGCAGCTGCCAACTTT
GCAAAACTGTTTTCTGTATACGAGCCTACAGGATGGGACCAGAAGCGCATCTGCTCGGAG
ATTTTTGACATTCTTCTCACCGGAGCCCCCGACCAGTACTTTCAGAACTGGCTGTGCAAC
TTGCTGGGAGACAAGGCACTAAAAAAGTGGCGAAAACAGGCCTCTGTGTGCTACGACGCG
TGCTTCAAGCTCATTGTCACTAACATGATCCCTGTTTGCGAGCGTATTGTGGTGCTTCTG
TCTTCCCTCAAAGGTCTGGGTGAATGGACCGAACGAGGTCTTGTTTTGGGTCTAGATCCC
GAGCCCTACAAGCGGGCTATATTCCAGACGATTGACCTCATGAAGACGCTCCGCCAACTG
CTGCGGGAATTCAGTTGTCGAAGCAAGTACTTTTTGGCATTCTTGGTGTGGTTACAGCAG
TTTTGTGAGCAGCTCAATGAGGTGGAGCCCAACCAGGGAGACGAGACTCTGGTTCCTATC
AAAACCGAGGACGTGGCCAACTATCTGTGTAACCACTTTTACGAGGAGGGAAGCAGCCAG
CCACTTGTCCACAATATTGATTCTCGTCTAGAGGAGCTTTGGGGGTCGTGTGATGTTGCT
TCGAAACGGGCGTGTGGAGCTATTCACAGTCTTGTCGATGTGGGTCAGAGCCAACCAATG
ACTTCCGGAAAGCTCTGGGATGTATTCAGCTCAGAGACAGCCACTTATGTGGCCACCACA
GATGTCTCTGGCACCACTCTCAATCTCTTTAGACTCTGCGATGGCAAGTCCAGCGTCTAT
CGAATGACACTGAAGGCCCCTCCAAAGCAACTTCAACTGGTTGATGCGGAATCTCTAATG
GTGCTCAATGGGGACGCTCTAGAAAGACTCGAATTTACCGACGATGACTTTGAGGGTCTT
GCTGGCGGTCTAGACGAGGTTTCTGTGGTGTCCATTCAGCCTGTTCAGAAGCGGGAAGCC
CAACTTGCCACATTTTCTATCAACGGCGCTCGGTCCATTGGATGCATGGTAGCTCCTGAT
CTTCAACGGTTCCAGGTCTTCGATTTGATTGACGAAGACGACGATGACGAGCCTGAAGCC
AAAGAGAAGAAGGAGAAGGAGAAGGAGGAGGAGTAAGAAGGCAGCAGACGGAGGAAGAGG
AGAAGGAGGAGATGATTATTTATTTTCAATGCATTAATTCTATAGCTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12705g_CDS-001

Protein length: 692 aa.
Product: Conserved hypothetical protein

>YALI0D12705g_CDS-001 MTQGKAFEPLHNGVLPAKTNPDLTSWCPTMDLVAFADSSGAMLFVYRMNAQLIWKHKQPL
ASANISNLSWSKDGRLLAIGYSDGTCNVHDSNTGKLIHHVIIPAGSETTQPSDLSCVKWI
NQSLKVQQQPTAVPEAQRLFDKFLDLDAFYQFPKLSSLASSKASVFSSRFAIEQMIQVAR
KLDGDIITEGSVNPEKNTLQKGGPVTQDMDILCSVTKQGFLRFDLFGLFTVDNIELGVAH
DTLRIGHRATSPTYHIIMQKGDQLTYLPIELKFLQKFGTYLVDVALTSSRILALLGYMRE
SFELLQTEMAASQKLAAANFAKLFSVYEPTGWDQKRICSEIFDILLTGAPDQYFQNWLCN
LLGDKALKKWRKQASVCYDACFKLIVTNMIPVCERIVVLLSSLKGLGEWTERGLVLGLDP
EPYKRAIFQTIDLMKTLRQLLREFSCRSKYFLAFLVWLQQFCEQLNEVEPNQGDETLVPI
KTEDVANYLCNHFYEEGSSQPLVHNIDSRLEELWGSCDVASKRACGAIHSLVDVGQSQPM
TSGKLWDVFSSETATYVATTDVSGTTLNLFRLCDGKSSVYRMTLKAPPKQLQLVDAESLM
VLNGDALERLEFTDDDFEGLAGGLDEVSVVSIQPVQKREAQLATFSINGARSIGCMVAPD
LQRFQVFDLIDEDDDDEPEAKEKKEKEKEEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG