YALI0D12749g

Overview

Description similar to uniprot|Q875G6 Podospora anserina Similar to GPI transamidase component PIG-S
Locus type CDS
Locus tag YALI0D12749g

Location

Species Yarrowia lipolytica Positions 1591820..1593374
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1555 (nuc.)
Previous locus YALI0D12727g Next locus YALI0D12771g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12749g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12749gYALI0D12749g_mRNA-001YALI0D12749g_CDS-001

Nucleotide sequence

 

>YALI0D12749g
ATGGTTCTCATCCCCAAGGAACCCAAGGAGCACGTGGAGCGTCGCGCCAACATTCTGGTG
GCGTACATTCTCACCTTTGTGCTTCTCGGCATGCCTTTATGGCTCTACACCACCTCAGTC
GAGCGAAGTCCTCTCCCCCACGATGAGATGGCCTACTACGACAGCACCGTCACGTCGGAG
CTGCACATCAAGGTGCCTGTGGTCTTCTCGGGCATTGATTCTGATACGGCCAAGGATATT
GAGGCCGAGTTGGCCCAGCAACTGGCGTCCCAGAACATCTACGGCTGGGGTATCATTCCG
TCCACCGAAGGCGTCCAGATCCACATTGCCGAAGCAGACACGCCCACCTACACAGTCGAC
ACCCAGGGCCAGGATATCAAGATCACGTCACCCAAGAACGATCTCGTCAAGGCCACCGTG
GCATCTATCCTGTCTGTCTACAAACCCGAGATTCAGGACTTTCTGCGGCTCGTGGGTCGA
AACAAGTCCAAGGACGATCTTGCCGTCATCTACTCGCCCCAGTACTACATCACGTTCTCG
CTGTTCCACGGCGGAGGCGTTCCTGTATCCTGGGACATTCAGCCGGCTCTGAAGGAGTAT
TTCGACCCTCTACTCAATGAACTGCAACATGTGGCCACCTTCAACGTTGACACCCAGGTA
GAACACCACGCGGAGCTGTCCCGAAAACCCGAAGAGATTGTGGACAACCAGTACGTGCTG
ACCCCCGGTGACCTCTCCACCTTCATCAACTCCGCTTCCTGGGGCCTCTCTTCTGTGCAC
AAAGACCCCACCCTGCACTTCATCCTCTACGTGCCCGACATTGAGGATCTGCCCATGCAC
ATCCAGGGCTCCGAGTCGGACTCATTTGTGGTGCCCCAGTGGGGAGGCGTCAAGCTCATC
AACGGCCAGACCCATTTCACCAAGGAGCAGCTCAAGCCCATTCTCGAGACCTTCTCCGCC
CAGCTGCTGACTCTGCTGGGTGCCCCAGCCGAGCCGTCTTCTCCTGCGATGCGAATCTCG
GCTCTTTCGCGTCTATTTGCCGTCAAGGCGCTGCTGATTTCTTCACAGACCCTGGGCTCG
CTTTCTCGACTCACAAAATCACTGCCTTCGATTGCCGTGCCCATTTCCACTATGAACGGC
GTGCAGAAGGCCATCGAGGACCTCAAGACAAGTATTGAGAGCCTGGAGCTGGGCAAGAAC
TGGAAGGCCGTGTACTTTGCCGCCGAGTCGATGAAGAAGGCCCAGGAGGGGTTCTTTGAG
AAGATGATGGTGCAGCAGATGTACTTCCCGGACGAGCACAAGGTGGCTGTGTATCTGCCT
CTTCTGGGACCCATTTTTGTTGTCATTCTGACTGGATTTGGGCGTGTTCTGCGAGAGCGA
AAAGCTCGCATTGGAGAGGAGGAGGCAGCACAGGAGGCTCTAAAGGGCCTGTCTGAGGAG
GACCGTAAGAAGAAGAAGGTCACGGTTGTGGCTGGAGATGTGCCCATTTAAGCGCTTCCT
CCAATTACCTTGTTATGATAATGTCTTATACGATAATAGAATAGTGTTTTTACGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12749g_CDS-001

Protein length: 497 aa.
Product: GPI transamidase component PIG-S, putative

>YALI0D12749g_CDS-001 MVLIPKEPKEHVERRANILVAYILTFVLLGMPLWLYTTSVERSPLPHDEMAYYDSTVTSE
LHIKVPVVFSGIDSDTAKDIEAELAQQLASQNIYGWGIIPSTEGVQIHIAEADTPTYTVD
TQGQDIKITSPKNDLVKATVASILSVYKPEIQDFLRLVGRNKSKDDLAVIYSPQYYITFS
LFHGGGVPVSWDIQPALKEYFDPLLNELQHVATFNVDTQVEHHAELSRKPEEIVDNQYVL
TPGDLSTFINSASWGLSSVHKDPTLHFILYVPDIEDLPMHIQGSESDSFVVPQWGGVKLI
NGQTHFTKEQLKPILETFSAQLLTLLGAPAEPSSPAMRISALSRLFAVKALLISSQTLGS
LSRLTKSLPSIAVPISTMNGVQKAIEDLKTSIESLELGKNWKAVYFAAESMKKAQEGFFE
KMMVQQMYFPDEHKVAVYLPLLGPIFVVILTGFGRVLRERKARIGEEEAAQEALKGLSEE
DRKKKKVTVVAGDVPI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG