YALI0D12683g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D12683g

Location

Species Yarrowia lipolytica Positions 1586180..1587314
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1135 (nuc.)
Previous locus YALI0D12661g Next locus YALI0D12705g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12683g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12683gYALI0D12683g_mRNA-001YALI0D12683g_CDS-001

Nucleotide sequence

 

>YALI0D12683g
ATGAACTACAGAACCGCGGCCATCAAGGCCCGTGAGGTGGTCAGACAGTCACATACGCCG
CGTTTCCAGGTGGCGCGGTCGCGGGCTCGAATTCTCGCGCTCTACCGCCAGATCATGAGA
TACACCAACAAGTTCACCAAAGACACCCCCGGATACAGACAACTGCAGGACGTTCCAGGA
CGAGACATGCTCCGATTCGCCATCTGGAACGCCTTCCACAAGAACAGATTTATTTCTGAC
CACAAATCGATCGACCTGATGGAGTTTGAGGGCCGGTTCTTTCTGCGCGATGCACTCAAA
AGTGTCACCAACAGTCTGGACAGATCGACAGAAAGTCTAGTTCAGGCCCAGCATTACAGC
AGAGACATTATTCGGCGTATGTACACCAACGACCACATTGTGGAGTTTCTGACGGCCCAG
GGACTCGTTCCCTCGTCGCCGCTCTATCAGAGCGTCATCCACGACCCTGCCCTCGAAACC
TCTCCTTCCCTCCAGTATGTTCGCAAATGGAAAAAATTTCTGGAAACCAAGTCCATGCCC
GTGGTCCGGGACTACGAACATCACAAACAGCTGCTCCGGCTCGAATCCGGCTCCTCTCTG
ACGTCCCACGGCCTGCAGTTCATGTCATGGTTGAAGACTAAGGAGATCATGGCTGTGCTC
TCCTCTGCCAAGAAATTCATTCATCTCAAGAGGGCGAAAATCTTCCCGCCAATGTTTGGA
CGTGTCTATAGAACCAAGGAGGGCTCATTATGGACAAAGGTCTGGAGACGAGCCTTTCAC
AGTTTGCCTCCCGTACTGGACATGGCCACATTCAAGCATCTCTCTAGTCTTGCTGACAAC
ATTGAAAACGACAAGTTTGGAGCCATGCGCGTACAACAAGTACTGGACGGCTTTGTGGGC
GTGGAAGAGTCGCCAGACGGCAAACTTGTCTGTCAAGTATACAAACCTCGACTCAGTAAG
GCTCTGAGACCAGGAGAATATCAGGTGTCACAGATTGGTCGTTCGAGGAAAGGCGAAGGC
ACCATTGACGCGTAGACTACTCACTGAGGTCAGCTCAGTGGGTGCTCCACTAACAACCCT
CATCATGTACATAACCACACAGCTATAGAATTAATGCATTGAAAATAAATAATCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12683g_CDS-001

Protein length: 345 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D12683g_CDS-001 MNYRTAAIKAREVVRQSHTPRFQVARSRARILALYRQIMRYTNKFTKDTPGYRQLQDVPG
RDMLRFAIWNAFHKNRFISDHKSIDLMEFEGRFFLRDALKSVTNSLDRSTESLVQAQHYS
RDIIRRMYTNDHIVEFLTAQGLVPSSPLYQSVIHDPALETSPSLQYVRKWKKFLETKSMP
VVRDYEHHKQLLRLESGSSLTSHGLQFMSWLKTKEIMAVLSSAKKFIHLKRAKIFPPMFG
RVYRTKEGSLWTKVWRRAFHSLPPVLDMATFKHLSSLADNIENDKFGAMRVQQVLDGFVG
VEESPDGKLVCQVYKPRLSKALRPGEYQVSQIGRSRKGEGTIDA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG