YALI0D11990g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D11990g

Location

Species Yarrowia lipolytica Positions 1483984..1486235
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2252 (nuc.)
Previous locus YALI0D11968g Next locus YALI0D12012g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D11990g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D11990gYALI0D11990g_mRNA-001YALI0D11990g_CDS-001

Nucleotide sequence

 

>YALI0D11990g
ATGAGACTTGCTCGAAAGACGCTATTACGGCCCAGAGTGGGCACTTTTCGAGTAAACACC
GCCCCGCTGTTGTGTAAACACTTACATACAGTCTCGAAAACCACTACAGTCACTTCTTTG
AGAGCACCGACACTGATCACCAGTTCGTGCACTACTACGACTGCTCCGTCTCGACACCTT
TCTACAAGCTCCTCGGTTGAAGAACAGACGGAATGTGCTTCGTGTAACACTCCTTTCCAC
ACCGAGGATCGAGATCAGCCTGGATTTTTCGTAGAGCCCAAGAAAGTCAACATCAAACAG
GAAACAGATCGGTTCAACTCCCTAATCGATAACATGAGTGCTGAGAACCTGGAGTTTCTG
GCCCGCGAGCAGAATCTAGTAAGCAATGACGAGCCCTTTGACGTTTTTGAGGCGAAGAAA
TATTACACCCAAAAGGTCAAACTGAAAGGAGAAGGCCCTAGAGTGTGTTTGCGATGTCAC
GAGCTGCAACGAAACAACATTGATGAGCGTGTTCCGTTTGTCAACCAAGTTAGAGAGGCC
TACGAGTTGAAAGAGGATATTCGAAAATACAACCAGGAGATTTTGGACATGATTTCGGCT
GAGGCTGACACTGCTACGGTGTTTCTGACTTGTTCCATTCACGACTTCCCTGCCAATGTT
CCCATCTTTTTGAGAAAACGACGGAATTTGAAACTCATCCTCACCAAGGCTGAGGGCGTC
ATCTACGTGCCGCAGATCAATTCAGTCAACGTGCAATTGTGGGCCGCTGCTCAAATGCAG
AGCCTTGGTTTCAAAATGTCCGCTGACAATGTCCATTTCTTCTCCGCCGAACATGACAAG
TCTGGAGGTCATCACCAATTCTCCATGTACGATCTGCAGCATGAGAAGAATGCCTTCATT
GTCGGTTATCCCAATACTGGCAAGACTTCTCTTTTCAATGTTCTCACCGAAGCCAAATTC
AGCAAGGACGCCAATGAATTGCGATACGCTCTCCCCAAGAATAGACGGGAGCTCAAAAAG
TGGAAGAACACCTCGTGGCACCCTGAACAGACTCTTATGCCGTGCACTAGAAAGATGGGA
ATGGGCAGGATCACAGATATGCCTGCTTTCAAGCGAGCCAACTCTCCCTGGAGTCTGGTT
GATCCCACCAACAATTCTTACCTCACCGACAAAATGATTCTGACTGATAATGCCCGCAAA
TTTGCCGGTTCTGATATCCACATCAAACGGAACCAGGTTGCTCTTGTGAGCGGTCTGTTT
GGAGTTGAAACCACCCCTGACTCCGAATTGCTCGTGTGGACTTCTATTCCCGGTAAAAAT
TGTCTAGCCAAGCATACCAACGCTGCCAAGGCCAATTTTGTGTGTCGAAAGGGCAAGGAT
CACGGCAGAGCCCAGTACAACCTGTTGGATATGGGCAAGGAGGATCTTCCTCAGCTGGCT
GAGCTTGGTACTGTTTCTTTTGATAAAGAAGACGGAGTTGGTGTTGAGGTGGCCTTCGAA
GGAGCTGGCTTTGCGCGAATCAAACGGACCGGCTCCAAGGAGCACGGGTCGCCCAAGGCT
GTCATTTGGGGTTTCCCTGGACAAGTTTTCGCCTTCCGACAGCCTCTGTGTGAGATCATG
TTGAACAACGATATGACTGTTAAGGGCTTTTTCGGACTCAAGGACCCCAACTGGAAGAGC
AACCGACAACCAATGTTCAACTACAAGGTCGACTTCCAGCCTACAGGCAACGTGGAGCAG
CTGGGAGGCTCAGAGTCCAACATGTACCGAGTCAAGGAGGGGGCGTTCACGCAGTTTTCT
CAAGAGCAACTGATGAGAGCCAAGCGAGTTGACCCCAAAACTGCCAAAGCGTTCAAGGTT
CAGCAAGAGCTGAAGCTCAAAAACCGTTCTCGAGCTCCTGACGGCGACGAGTTCCTGTCT
CCTGATGATTTGGAGATCATGGACAAGGCCAATGAGCGAATTCGACAGAAAAAGGGCACT
TCCAAGAAAGGAGATAAGAAGGCGCAGGGTCTGATTTGGACAAAGGTGGGCTCCTCCAAG
AACATCAAGTCTTGGAAGTGGCTGACACCCGAGGAGGCCGAGAAACACGCTCATAACCAG
GACCCGAACTGCATGTGGTTCAAGCAAAAGCATGGTGACCAGACCTTCGAGGAGGTTATT
GCGAAGTACAAGAAGAGAGGCAATCGGTTGAATAGTGGAGGAAGGAGATGATTGTACATA
GTTAATTATTGGTTTTAGACCCACTGAACATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D11990g_CDS-001

Protein length: 737 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D11990g_CDS-001 MRLARKTLLRPRVGTFRVNTAPLLCKHLHTVSKTTTVTSLRAPTLITSSCTTTTAPSRHL
STSSSVEEQTECASCNTPFHTEDRDQPGFFVEPKKVNIKQETDRFNSLIDNMSAENLEFL
AREQNLVSNDEPFDVFEAKKYYTQKVKLKGEGPRVCLRCHELQRNNIDERVPFVNQVREA
YELKEDIRKYNQEILDMISAEADTATVFLTCSIHDFPANVPIFLRKRRNLKLILTKAEGV
IYVPQINSVNVQLWAAAQMQSLGFKMSADNVHFFSAEHDKSGGHHQFSMYDLQHEKNAFI
VGYPNTGKTSLFNVLTEAKFSKDANELRYALPKNRRELKKWKNTSWHPEQTLMPCTRKMG
MGRITDMPAFKRANSPWSLVDPTNNSYLTDKMILTDNARKFAGSDIHIKRNQVALVSGLF
GVETTPDSELLVWTSIPGKNCLAKHTNAAKANFVCRKGKDHGRAQYNLLDMGKEDLPQLA
ELGTVSFDKEDGVGVEVAFEGAGFARIKRTGSKEHGSPKAVIWGFPGQVFAFRQPLCEIM
LNNDMTVKGFFGLKDPNWKSNRQPMFNYKVDFQPTGNVEQLGGSESNMYRVKEGAFTQFS
QEQLMRAKRVDPKTAKAFKVQQELKLKNRSRAPDGDEFLSPDDLEIMDKANERIRQKKGT
SKKGDKKAQGLIWTKVGSSKNIKSWKWLTPEEAEKHAHNQDPNCMWFKQKHGDQTFEEVI
AKYKKRGNRLNSGGRR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG