YALI0D11968g

Overview

Description similar to uniprot|Q02948 Saccharomyces cerevisiae YPL120w VPS30 involved in vacuolare protein sorting and autophagy singleton
Locus type CDS
Locus tag YALI0D11968g

Location

Species Yarrowia lipolytica Positions 1482209..1483685
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1477 (nuc.)
Previous locus YALI0D11924g Next locus YALI0D11990g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D11968g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D11968gYALI0D11968g_mRNA-001YALI0D11968g_CDS-001

Nucleotide sequence

 

>YALI0D11968g
ATGTCGCTATGTCAACGATGCAAGCTGCCGTTGGCGTACGGCGACTCGCTTCTGGATCTC
AACCAGGCCCAAATGAAGACTCTACAGACTAAAGCTGAGCAGAACAAACCGGATGGAGAA
TCGAACACCAATCTTGATCCTCAGGCTCTGGACAAGTTCAACCGGGCACGGGAGACGGCT
CTTAAACGTGGCACCATGTCCGGGGACTCGTTTGTCTTTCTGTCGCAATCTCAGGTCGGT
CACACGCCTCCCAACCCCAACAATGTGAAGACGACTGCCAGTGATTCCAACTCCATCAGC
ACACGTATCACGGCTTTAGAGACGTTGTTTGACGTCATCAGCTCCACGTCGTCGATTGAC
TTTCCCATCTGCACGGATTGCGGCGACCAAATTAGAGAAGGTCTCAAAACTCGATTTGAA
CAGACGTCCAAGGAGAGGGACGTGTTTGCTCGCTTCCTCAACAAGCTGAGAGACAGCGAC
GGCGAGGAGGAGGATCTGGCGGTAAAACAGCGAGAGCTGGAGAAGCTGGAGGGTGAGAAG
GAGGCGGCATTGTCTGAGCTCAAATCCCAGGAAAAGGAACTGGATGAATTAGAGAAAGAG
ATCCAGGCACTCGAAAAGGAGAAAACGGACCTCGAGTCGCAGGAGCCCCGGTTCTGGCAG
CTGCAAAACGAGCTGTATCTCGACATTGAGGAACACAAGCAGGAGAGGGACTCCCTCATC
ACACAGTACAGAAACCTCAAGGATGAACAGGAAAAGCTGTCCAAGGTGAACGTATATAAC
GATGCCTTCTGCATTGGACACGATGGATACTTTGGCACCATCAACGGACTCCGACTCGGC
CGACTCAAGAACCGAATGGTTGAATGGTCCGAAATCAACGCAGCTTGGGGGCAGACGCTG
TTTCTACTGGCGACAGTGTGTCACAAACTGGGATTCAAGCTGTCCGGATACAAACTGCAT
CCCATGGGAGGAGTATCGCGAATAGACAAGTACTCGGATACAGATGGTGTGGTGACGAGC
CAGGAGCTGTTCTCCTCAGGTGACTATTCGTTTGAACGAATTCTCAACCATAAGAAGCTC
GATAATGCCATGGTCTCTGTTCTGGCAGTGCTACAGCAAATTGGAGAGTATGTGGAGTCT
CTGGATCCGTCGTTGAAGTTGCCATATCGGATTTCAAAGGACAAGATTGGAGGCATCAGT
ATCAGACTGTCTATTAATGCTTCTAATGACTCGTGGACAACTGCTTGCAAATATGTCTTG
ACGAATGCAAAATGGCTGTTGGCTTTTACTAGCACGAGAAGGTGAGCCGGGAACGAAGCA
GCAAATGTAGTAGGAAGTACGGCTACGGTTGATACCGTAATTCAAGCACTGACTGGTCGC
TTTGGTACTGTCAAAGGCACTGCAAGGTGTATATATATATATATATCTGTAACTCCACAG
TCACTGTCTGACAAACCAATATTATATTTATTTATTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D11968g_CDS-001

Protein length: 435 aa.
Product: Subunit of phosphatidylinositol (PtdIns) 3- kinase complexes I and II, putative

>YALI0D11968g_CDS-001 MSLCQRCKLPLAYGDSLLDLNQAQMKTLQTKAEQNKPDGESNTNLDPQALDKFNRARETA
LKRGTMSGDSFVFLSQSQVGHTPPNPNNVKTTASDSNSISTRITALETLFDVISSTSSID
FPICTDCGDQIREGLKTRFEQTSKERDVFARFLNKLRDSDGEEEDLAVKQRELEKLEGEK
EAALSELKSQEKELDELEKEIQALEKEKTDLESQEPRFWQLQNELYLDIEEHKQERDSLI
TQYRNLKDEQEKLSKVNVYNDAFCIGHDGYFGTINGLRLGRLKNRMVEWSEINAAWGQTL
FLLATVCHKLGFKLSGYKLHPMGGVSRIDKYSDTDGVVTSQELFSSGDYSFERILNHKKL
DNAMVSVLAVLQQIGEYVESLDPSLKLPYRISKDKIGGISIRLSINASNDSWTTACKYVL
TNAKWLLAFTSTRR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG