YALI0D11924g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D11924g

Location

Species Yarrowia lipolytica Positions 1480229..1481720
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1492 (nuc.)
Previous locus YALI0D11897t Next locus YALI0D11968g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D11924g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D11924gYALI0D11924g_mRNA-001YALI0D11924g_CDS-001

Nucleotide sequence

 

>YALI0D11924g
ATGGAATTCCCTCCGGAAATTGTGTACAATATATTTGCCCATGCCGAGCTCGAAACGTGT
GTGGATTTGAGGGAAGTGAGTACCCTCTGGTACGCGGCATTCAACCAGCTGGATGCACGG
CTCTTGAAGCAGAAAGTAAAAGAGAGGAACCCTTGGTTGAAGCCTGGAGAAGACGGAACG
GAACTGAAAACATGGAGGGATTGTGTCCGGGTGTTTGTGGGACGTTTGCGGTCAGGTAAG
TGGACGTCAATTGAGTGTCTCGAGGACATTAAATACCCTACGGAGCTGACAGAAGCGATT
TCCTTGAATATTGACGAGGTAGAGACCACTCTTCCAAAAGATTACAAGCCTCTGATGGTC
ACGCGAGAGCCACAGTACAACACCATGTTGAAGCTGGATGACAATTACTACATGGACTTG
CATACCCTGATGGCTCGTAGATCTCAGCCTCCTTCATGGCAACAGGACTTTGTCAGGACA
GTTGAAGAGACTGACGAAGTAGGAGTATACGACTGTGATGGTGTGAGAGTTGTTGTTCCG
ATAGACATGGTCACGAATGAAACAAGCTGGGACGTCAACGAAGACATGGTGGTGGTGTAC
ACCGCACAGGACGTGTGGATTTTGCCTCGAGAATACCCAGACTTTCGGCAAGGACGCGGA
TGGAAGCGTTCAAGAACGGGAATCACTAACCGAAGAGTTCAAAGAAATATGACCTCTGGT
TATACGTTTTTGGTCGAGGATGATGATCTTTTGCGGGTTCCACAGCCAATGGTGCTTGCT
GTCGATCTGGACAACCGACGAGTGCTTCACATTGCAGAGACACGAGATGACAAGTTTGAT
GAATCACATGTCGATACTGACGAGGTTCCCAAAACTAATTCGTTTCTATCGTCGGACGCA
AGAGTTAACTCGGTTTATAATGGGCTCCTATGGATGGCAGACTGTTCTCCAGAAGGGCAC
ACAGGGTTATTTCCCATTTTCATCGACATGAAAGATATTCCTGAGGACGATGGAAGTGGC
ACTACAAGAGTGAGCAAGATGTACTATTGTAAAAACCGGATCATGCTGTTCAAAAAGTAC
ATGGACTCTGGCTTCTCTAGTACCCCACGGCAGGCTCAACGATACGTACTGTTTTTCGAT
AATACGGTGTATTTTGGGGGAAAGAAACAAGAATCTTCATTTATTGTGGATCTGGCTAGC
TGGAATGTCTGGTTGATGAAAGAAGACTTTGAACTGAACCAAGGCTCTCTATTTGGACGA
GAATTGTTTGTTGGATATTCAGAGGGAAAACTGGGAGCCTGGATGTACAGTCAGGATATG
ATCGATATCTACAAGACACGTTTACTGCGAATGAAGATGTTGTATCCACGCAGGGGGGAA
TATGACGTGAGCAGGGACAGGAGCCTGGAGGATGATTTTGAGGTACAGGACCAGTTGGAG
TAGAGTAGGAGTAGGAGATGGTGTTATAATTTATTGTAATTTGTGTTTTTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D11924g_CDS-001

Protein length: 481 aa.
Product: Hypothetical protein of a 30-member gene family, conserved in the Yarrowia clade

>YALI0D11924g_CDS-001 MEFPPEIVYNIFAHAELETCVDLREVSTLWYAAFNQLDARLLKQKVKERNPWLKPGEDGT
ELKTWRDCVRVFVGRLRSGKWTSIECLEDIKYPTELTEAISLNIDEVETTLPKDYKPLMV
TREPQYNTMLKLDDNYYMDLHTLMARRSQPPSWQQDFVRTVEETDEVGVYDCDGVRVVVP
IDMVTNETSWDVNEDMVVVYTAQDVWILPREYPDFRQGRGWKRSRTGITNRRVQRNMTSG
YTFLVEDDDLLRVPQPMVLAVDLDNRRVLHIAETRDDKFDESHVDTDEVPKTNSFLSSDA
RVNSVYNGLLWMADCSPEGHTGLFPIFIDMKDIPEDDGSGTTRVSKMYYCKNRIMLFKKY
MDSGFSSTPRQAQRYVLFFDNTVYFGGKKQESSFIVDLASWNVWLMKEDFELNQGSLFGR
ELFVGYSEGKLGAWMYSQDMIDIYKTRLLRMKMLYPRRGEYDVSRDRSLEDDFEVQDQLE
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG