YALI0D11374g - SDH1

Overview

Description uniprot|Q6C9G6 Yarrowia lipolytica YALI0D11374g SDH1 Succinate dehydrogenase
Locus type CDS
Gene name SDH1
Locus tag YALI0D11374g

Location

Species Yarrowia lipolytica Positions 1423499..1426214
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2716 (nuc.)
Previous locus YALI0D11352g Next locus YALI0D11396g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D11374g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D11374gYALI0D11374g_mRNA-001YALI0D11374g_CDS-001

Nucleotide sequence

 

>YALI0D11374g
CATACAAGTCGATCTGAGTCGGTGAGTAGCAAATTGCGCGGCGGAGGACGGGGCGCTTCG
AGGCACATTGACGGCAGCCATTCGTACCCACGATGTGGACGGTCTTGCCCGGTATCTCTC
AGTGCAACAGGTTTTTCGTTCGGCAAAAGGAGAAGTGGGACACCCAGCAGCTTGTTTGGC
TGTACGCGTGGCGAGCATGTTGGCAAGCGTGAAGGAGAGAGGTTATCACAAGTGCGTTGG
CGTGACGATGACAACGGAGCCTATGCTTCGCAGCATCATTCTTATGGTCCACTCTTCTGT
CGGTGCCATGGTTTGGTGGTTCTCTCGTGGTATGTTAGACAACACATTCAGTGTGACATG
TGGATATGTGAGGTGTGAATGAGAGCAAGTGGTACAGACACGAGTTCAGTGAAACAAGAA
CCAATGCTTAAAGGTACACGCGAACCTGACCGGTGTTGCTTCTTTCACCCAGTTGCTGGG
ATACTCTGAATGTCAGACTGTCTTGAAAATTTCAGTCTGTCAACCGCCGATGCTCTCACA
GTCTATCCCCACAACACACCCTCTGATACCACAACCACTATATACAGTCACTGCGGACCA
CTCTGCAGTAAATCATCCAGACAACTATTCTCTACCTACCGGAATACGCAAAACACCTCT
CCACCCCACAACGCCTGCAGAAAACCCCACAACACAACTAACACAGAAATGCTTAGAGCT
ATCAAAAACCCCCGAGCCGTTCTCAAGTCTCGTCACTTCTCCACCTCCCCGGTGGTGGCC
AAGGTCTTCGCCAACGGCCCCGTCAAGGCCCAGGAGGCCCCCTCCCACGTGGCGTCCAAG
TACGCCGTCGTCGACCACGAGTACGATTGTGTTGTTGTTGGAGCCGGTGGAGCCGGTCTC
CGAGCCGCCTTCGGTCTGGCCGAGGCTGGCTTCAACACCGCTTGTATCTCCAAGCTGTTC
CCCACCCGATCCCACACCGTCGCTGCGCAGGGAGGTATCAACGCCGCTCTCGGAAACATG
CACCCCGATAACTGGAAGTGGCACATGTATGACACCGTCAAGGGTTCCGATTGGCTCGGA
GACCAGGACGCCATCCACTACATGACCAAGGAGGCCCCCAAGTCCATTATCGAGCTGGAA
CACTACGGTGTTCCCTTCTCTCGAAACGACGAGGGCCGAATCTACCAGCGAGCCTTCGGT
GGTCAGTCCAAGGACTACGGTAAGGGAGGCCAGGCCTACCGAACCTGTGCCGTTGCCGAC
CGAACCGGCCACGCCATGCTGCACTCTCTTTACGGACAGTCTCTCCGACACAACACTCAC
TTCTTTATTGAGTACTTCGCCATGGACCTGCTCATGGAGGACGGCGCCTGTGTCGGTGTC
GTTGCCTACAACCAGGAGGACGGAACCCTGCATCGATTCCGAGCCCACAAGACCGTTCTG
GCCACCGGTGGTTACGGACGAGCCTACTTCTCCTGTACCTCTGCCCACACCTGTACTGGT
GACGGTATGGCCATGGTCACCCGAGCCGGCCTTCCCCTCCAGGATCTGGAGTTTGTCCAG
TTCCACCCTACCGGTATCTATGGCTCCGGCTGTCTGATTACTGAGGGATCCCGAGGTGAG
GGAGGATACCTGCTCAACAAGAACGGTGAGCGATTCATGGAGCGATACGCTCCCACCGCC
AAGGATCTGGCCTCCCGAGATGTCGTGTCTCGATCCATGACCCTGGAGATCCGAGAGGGC
CGAGGTGTTGGCCAGCACGGCGACCACATCTTCCTCCAGCTGTCGCATCTGCCCGCCTCC
GTGCTCCACGAGCGACTCCCCGGTATTTCCGAGACCGCCGCCATTTTCGCTGGTGTTGAC
GTTACCAAGGAGCCCATCCCCGTTCTCCCCACCGTTCACTACAACATGGGTGGTATCCCC
ACGCGATACACCGGTGAGGTCCTTACTCAGGATGAGAACGGTCAGGACAAGGTTGTCGAG
GGTCTGTTCGCCTGTGGTGAGGCCGCCTGTGTCTCCGTCCACGGTGCCAACCGACTTGGA
GCCAACTCCCTGCTCGATCTGGTTGTCTTCGGCCGAGCCGTTGCCCACCGAATCACCGAG
ACTCTTACCCCCGGTGCTCCTCTTCCCCCTGTCTCTGCTGACATTGGTTACGAGTCCATT
GCTAACCTTGACAAGATGCGAAACGCCGACGGTCCTCTGTCCACCGCTACCATTCGAGAC
AAGATGCAGCGAACCATGCAGATGGATGTCTCCGTTTTCCGAACCCAGGAGTCTCTTGAG
GATGGTGTCCGAGGTATCACTGCTGTTGACCGACTCATTGACCAGGTTGGTGTCACCGAC
CGATCCATGATCTGGAACACTGATCTTACCGAGACCCTCGAGCTGCAGAACCTGCTCACC
TGCGCCATGCAGACCGCCTACTCTGCCGTCGCCCGAAAGGAGTCTCGAGGTGCCCATGCC
CGAGAGGATTACCCCGACCGAGACGATGTCAACTGGATGAAGCATACCCTCTCCTGGCAG
GATAAGCCCGGTGACGAGATCAAGCTCGGCTACCGAGCCGTCCAGATGCACACCCTCGAT
GAGTCTGAGTGTCCTACCGTCCCTCCCGCCAAGCGAGTCTACTAAGTGTAGTAGGGTTGT
CTGTCTGTCTACTAAGCATGTATATGAAATGAAAAGTACGTTAATGGAATTATCCTGTAG
TGACGAGTTATCCGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D11374g_CDS-001

Protein length: 639 aa.
Product: Succinate dehydrogenase
Gene: SDH1

>YALI0D11374g_CDS-001 MLRAIKNPRAVLKSRHFSTSPVVAKVFANGPVKAQEAPSHVASKYAVVDHEYDCVVVGAG
GAGLRAAFGLAEAGFNTACISKLFPTRSHTVAAQGGINAALGNMHPDNWKWHMYDTVKGS
DWLGDQDAIHYMTKEAPKSIIELEHYGVPFSRNDEGRIYQRAFGGQSKDYGKGGQAYRTC
AVADRTGHAMLHSLYGQSLRHNTHFFIEYFAMDLLMEDGACVGVVAYNQEDGTLHRFRAH
KTVLATGGYGRAYFSCTSAHTCTGDGMAMVTRAGLPLQDLEFVQFHPTGIYGSGCLITEG
SRGEGGYLLNKNGERFMERYAPTAKDLASRDVVSRSMTLEIREGRGVGQHGDHIFLQLSH
LPASVLHERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTRYTGEVLTQDENGQD
KVVEGLFACGEAACVSVHGANRLGANSLLDLVVFGRAVAHRITETLTPGAPLPPVSADIG
YESIANLDKMRNADGPLSTATIRDKMQRTMQMDVSVFRTQESLEDGVRGITAVDRLIDQV
GVTDRSMIWNTDLTETLELQNLLTCAMQTAYSAVARKESRGAHAREDYPDRDDVNWMKHT
LSWQDKPGDEIKLGYRAVQMHTLDESECPTVPPAKRVY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG