YALI0D11396g

Overview

Description similar to uniprot|P35718 Saccharomyces cerevisiae YKL144c RPC25 DNA-direcred RNA polymerase III, 25 KD subunit singleton
Locus type CDS
Locus tag YALI0D11396g

Location

Species Yarrowia lipolytica Positions 1427306..1428166
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 861 (nuc.)
Previous locus YALI0D11374g Next locus YALI0D11418g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D11396g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D11396gYALI0D11396g_mRNA-001YALI0D11396g_CDS-001

Nucleotide sequence

 

>YALI0D11396g
ATGTTCATTCTCACGCGCTTCACAGATCTCATTCGACTCGATCCCACCAGCTTCAAAAAG
CCGCTCAACGACGCTATTGTGGACGAGATTAACAACTGCTACGCTAACAAAATCATCGAC
GGAGTGGGTCTGTGCATCTGTGTCTATGACCTGATCACTGTCGGCGAAGGCCAGGTCATG
TCCGGCGACGGTGCTGCATTTGTGAAAATCACCTTCAGAATGGTGGTTTTCCGGCCGTTT
GTGGGAGAGGTACTAGAGGGCTGGATCTCCAGCTGTACCGCGGAAGGAATCAAGGTGAAG
ATGGAGTTCTTCGACGACATTTTTATCCCCGCACACCTGCTGTTTGAAAACTCGCAGTTT
GTCGCCCGAGAACAGGCCTGGATGTGGTGTCCTGACGAGGAGCAGGAGCTGTTTTTGGAT
ACCAACGAAAAGATCCGGTTCCGAATCGAACAAGAAAAGTTCCAGGACCTGCCTCCACTC
AAGCAGGGCTACGCTGGAAGTGCTGCTCCTAACGACGAGCAGGACCCCGAGAAGCCAGGT
GTTCCTCCTTACTCTCTGATTGCCAGTTGCCAGGGAGAAGGCATGGGTCTGGTGTCTTGG
TGGGAGTAATCAACAGAACCATGTTCCTTCAGGTACATCTTGGTTGACGGTTGGAGGAGG
ATATATATATGCATTATTAGGTGTTCCGGACAGCACTCTGTATTCCGGGCACACTCTTGT
GCTCCTTGGAGTATGGACACAAGGCAAACAAAAACAAACAAGCAAACGCAAAGAAAAGGA
CTGATTATGAAATAGGACTGCTAAGAAGCAGTGGGGTTTTATATAGATAGACAAAGTCAC
AAATCGCATTTTTATACAACA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0D11396g_CDS-001

Protein length: 203 aa.
Product: RNA polymerase III subunit C25, putative

>YALI0D11396g_CDS-001 MFILTRFTDLIRLDPTSFKKPLNDAIVDEINNCYANKIIDGVGLCICVYDLITVGEGQVM
SGDGAAFVKITFRMVVFRPFVGEVLEGWISSCTAEGIKVKMEFFDDIFIPAHLLFENSQF
VAREQAWMWCPDEEQELFLDTNEKIRFRIEQEKFQDLPPLKQGYAGSAAPNDEQDPEKPG
VPPYSLIASCQGEGMGLVSWWE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG