YALI0D11352g

Overview

Description weakly similar to uniprot|P24309 Saccharomyces cerevisiae YKL149c DBR1 lariat-debranching enzyme
Locus type CDS
Locus tag YALI0D11352g

Location

Species Yarrowia lipolytica Positions 1422164..1423552
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1389 (nuc.)
Previous locus YALI0D11330g Next locus YALI0D11374g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D11352g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D11352gYALI0D11352g_mRNA-001YALI0D11352g_CDS-001

Nucleotide sequence

 

>YALI0D11352g
ATGCCCGTGGATCTGGTGATGATTGGAGGTGACTTTCAGGCCGTCCGAAACGAACGGGAT
CTGCTCTCGATGAACGTACCGGCCAAATACAGAGAGATGCACGACTTCCACAAGTACTAC
TCGGGTGAATCAACGGCTCCGTACCTCACCATCATCATTGGAGGCAACCATGAGTCGTCA
GGGTACATGCAGGAGCTGTACTACGGAGGATGGCTGGCACCTAATATCTACTACCTAGGA
GCTGCTGGAGTGGTCAACTATAAGGGTCTTCGGATTGGGGGAATCTCAGGTATCTACAAC
CAGCGCAGCTACAAAACTGGTCATCACGAACGACTTCCCTACGACAACTCTACCATTAGA
AGTGTATATCACGTCAGGGCCCATGATGTGATGAAAGCTTCTCTTATTGATAACGGTATT
GATATCTTCATGTCTCACGACTGGCCCGCGGGCATTGAGCACTTTGGAAACACAAAGAAG
CTGCTCGATCAGAAGAAGCATTTCAGAATCGACGTGAAAAACGGCACTCTGGGGTCTCCT
CCTGCAATGGAGCTCCTCAAGCGGCTGAAGCCTGCCCAATGGCTCAGTGCACATCTTCAT
TGCAAGTTTGTCGCCACTGTCGACCACGAGAAGCTGGAGGCGGCGAATGGAGCCACCAAA
CAGAGATCTTCTCCTGAAATCAAGAACCCAGACGAAATAGTTCTTGATGAGTTGGAAGAC
ACGAACCACGAGACAGGTGAAATCGACATTTCTGAAGACATCGACAGTGGAGAGACTGGA
GAGATTGATATTTCCGAGGACGTCAAAGGTGAAACCGACATTGATGCAAACACCACACAT
GATGAAGCCACTCCCGTGATAGCAAAGAAACCTCTGGCCAAAAAGACTGACTTTCTAGCA
CTGGATAAATGTCTTCCTAAACGCCAATTCATCGAAAGACTCGACATTGACCATGAGCCT
ACCTCAGATGGGCTTCAATACGACCCCGAATGGCTGTCTATTGTGAGATGCACAAACCAC
CTTTTTACCAGATCACACGCCCTTCACCAAGCACATCCTCGAACTTTGGATGAACTGCAA
GCTCTCAGAAAGATGGTCAAAGACGACTATGCGTGGGTCAAGGAGAACATTGTCGACAAA
GGCAAGTTAGACATCCCCAACAACTTTGTCCAGACAGCTCCAGTGTATACAGGAGCTGAT
ATTCACAATGTGTCTCAGCAGAAACAACTACCAAAATACAAAAACCCTCAAACCGAGCAG
TTTCTGAGAATGCTCGACGTCCCTAATAAGCTGTAACATACTAGAGTATGAACAGATACT
AAATCATTTGCATCTATCGGATAACTCGTCACTACAGGATAATTCCATTAACGTACTTTT
CATTTCATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D11352g_CDS-001

Protein length: 432 aa.
Product: Conserved hypothetical protein

>YALI0D11352g_CDS-001 MPVDLVMIGGDFQAVRNERDLLSMNVPAKYREMHDFHKYYSGESTAPYLTIIIGGNHESS
GYMQELYYGGWLAPNIYYLGAAGVVNYKGLRIGGISGIYNQRSYKTGHHERLPYDNSTIR
SVYHVRAHDVMKASLIDNGIDIFMSHDWPAGIEHFGNTKKLLDQKKHFRIDVKNGTLGSP
PAMELLKRLKPAQWLSAHLHCKFVATVDHEKLEAANGATKQRSSPEIKNPDEIVLDELED
TNHETGEIDISEDIDSGETGEIDISEDVKGETDIDANTTHDEATPVIAKKPLAKKTDFLA
LDKCLPKRQFIERLDIDHEPTSDGLQYDPEWLSIVRCTNHLFTRSHALHQAHPRTLDELQ
ALRKMVKDDYAWVKENIVDKGKLDIPNNFVQTAPVYTGADIHNVSQQKQLPKYKNPQTEQ
FLRMLDVPNKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG