YALI0D10109g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D10109g

Location

Species Yarrowia lipolytica Positions 1279933..1281213
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1281 (nuc.)
Previous locus YALI0D10104g Next locus YALI0D10131g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D10109g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D10109gYALI0D10109g_mRNA-001YALI0D10109g_CDS-001

Nucleotide sequence

 

>YALI0D10109g
ATGCCGCCAACGCAACATCTGAAGGCTCTGCGCATCTCTCCAGCGAACACGGTCACCAAC
CACGTGGCTACTAGCATCGTCTCGGACACAGGATCCATAGCCGGAGTGGGATCGTCCCTA
CTTTGGGTGAAGCATGGATACATCAATTCGGCGGCCGAAATCATTGCCACGCCGCCCGAC
ACAGCCATTGGACGGTCCCATGGCTCCTTCAAGCATCTGAAGCACAGCGGCGGCACTACC
GTGAGCTCCAGGGGCACTCTGCACAACGTGACGATGGATGGCTCCCGTGATTGGCTGGTT
CGGTCCTCAACTATGATCTTCCACAGCGGACTGTCCATCGGCTCGTCTCCCAAGCAGCTC
AGCAATCTACATTTTGATCTTGTTTCGGGCCGAGGCAACTTCTTCATCAACAGCTACAAC
GCCCAGATCACAGAGGTGCCTGCTGGCCAGAGCTTCTACGTTGACAAAACCTCTCTTCTG
GCAGTGGAGTATGACCAGAATACCGCATTTGAGATTGTCGGCAATAAACCATACACGCCG
GCGCTCAAGAACAGCAAGGACACCTTGGATGTGAGTCCAGTGACGTCCATTCTCGAGACT
ACAGAGATTCCTCGAGATGATCTTCCGGAGACAAAACAACACAAACAGGCTGATAATGCG
ACAGAAAACAAACCATCTGCTAAACCTACAACCCTCCAGTATCAAGTCCCTGACTCGCAA
GTCGCCGAACCCCACTACTACCTCTACAACAACCGATGGTGGATCACCACGTCCAAGTTG
TCGCGAAAACTCGTCCGCAGTATTGCAAGTATACCCTCTTCGCTGGTGAACATGTTCAGG
CGGTCTTCCAAGAAGGCAGCAATTGCAGCTAAAAATGCAGCCAAAAGTGCGGTCACCTTT
TCCAAAAAGCCCCCGACTGGTCATCCTGATAGCACTGAGGCACCCACAAGTATCCCCAGA
CCGTCGCTGGTCGCTCGCATCAAGACCTTTATTGGCTCATACACTAATCCTAGCCCCTTC
CAGACTTTTGTCCATATCAGAGGTCCCACTAAGGTCGTGGTTGGACAGATGCATATGCCC
AAGGTGACCACCCAGGCCAATGACATCGAGCCCTACATCACCGAGCCCGAGCTTCCTGCG
CCCGTCGCCTTTGCTCCTCAGACTCACGATTACTTGAAGATTGCAGAGGTCATCAACGGA
CGAGTGGTGTTTCGATCCGTCCCCAACTTTTCCACCTACAATGGTGTTAACGGACAATAA
TGAATGTATATGAACTAAAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D10109g_CDS-001

Protein length: 420 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D10109g_CDS-001 MPPTQHLKALRISPANTVTNHVATSIVSDTGSIAGVGSSLLWVKHGYINSAAEIIATPPD
TAIGRSHGSFKHLKHSGGTTVSSRGTLHNVTMDGSRDWLVRSSTMIFHSGLSIGSSPKQL
SNLHFDLVSGRGNFFINSYNAQITEVPAGQSFYVDKTSLLAVEYDQNTAFEIVGNKPYTP
ALKNSKDTLDVSPVTSILETTEIPRDDLPETKQHKQADNATENKPSAKPTTLQYQVPDSQ
VAEPHYYLYNNRWWITTSKLSRKLVRSIASIPSSLVNMFRRSSKKAAIAAKNAAKSAVTF
SKKPPTGHPDSTEAPTSIPRPSLVARIKTFIGSYTNPSPFQTFVHIRGPTKVVVGQMHMP
KVTTQANDIEPYITEPELPAPVAFAPQTHDYLKIAEVINGRVVFRSVPNFSTYNGVNGQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG