YALI0D10131g - PDC1

Overview

Description uniprot|Q6C9L5 Yarrowia lipolytica YALI0D10131g PDC1 Pyruvate decarboxylase, putative
Locus type CDS
Gene name PDC1
Locus tag YALI0D10131g

Location

Species Yarrowia lipolytica Positions 1283067..1284826
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1760 (nuc.)
Previous locus YALI0D10109g Next locus YALI0D10153g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D10131g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D10131gYALI0D10131g_mRNA-001YALI0D10131g_CDS-001

Nucleotide sequence

 

>YALI0D10131g
ATGAGCGACTCCGAACCCCAAATGGTCGACCTGGGCGACTATCTCTTTGCCCGATTCAAG
CAGCTAGGCGTGGACTCCGTCTTTGGAGTGCCCGGCGACTTCAACCTCACCCTGTTGGAC
CACGTGTACAATGTCGACATGCGGTGGGTTGGGAACACAAACGAGCTGAATGCCGGCTAC
TCGGCCGACGGCTACTCCCGGGTCAAGCGGCTGGCATGTCTTGTCACCACCTTTGGCGTG
GGAGAGCTGTCTGCCGTGGCTGCTGTGGCAGGCTCGTACGCCGAGCATGTGGGCGTGGTG
CATGTTGTGGGCGTTCCCAGCACCTCTGCTGAGAACAAGCATCTGCTGCTGCACCACACA
CTCGGTAACGGCGACTTCCGGGTCTTTGCCCAGATGTCCAAACTCATCTCCGAGTACACC
CACCATATTGAGGACCCCAGCGAGGCTGCCGACGTAATCGACACCGCCATCCGAATCGCC
TACACCCACCAGCGGCCCGTTTACATTGCTGTGCCCTCCAACTTCTCCGAGGTCGATATT
GCCGACCAGGCTAGACTGGATACCCCCCTGGACCTTTCGCTGCAGCCCAACGACCCCGAG
AGCCAGTACGAGGTGATTGAGGAGATTTGCTCGCGTATCAAGGCCGCCAAGAAGCCCGTG
ATTCTCGTCGACGCCTGCGCTTCGCGATACAGATGTGTGGACGAGACCAAGGAGCTGGCC
AAGATCACCAACTTTGCCTACTTTGTCACTCCCATGGGTAAGGGTTCTGTGGACGAGGAT
ACTGACCGGTACGGAGGAACATACGTCGGATCGCTGACTGCTCCTGCTACTGCCGAGGTG
GTTGAGACAGCTGATCTCATCATCTCCGTAGGAGCTCTTCTGTCGGACTTCAACACCGGT
TCCTTCTCGTACTCCTACTCCACCAAAAACGTGGTGGAATTGCATTCGGACCACGTCAAA
ATCAAGTCCGCCACCTACAACAACGTCGGCATGAAAATGCTGTTCCCGCCCCTGCTCGAA
GCCGTCAAGAAACTGGTTGCCGAGACCCCTGACTTTGCATCCAAGGCTCTGGCTGTTCCC
GACACCACTCCCAAGATCCCCGAGGTACCCGATGATCACATTACGACCCAGGCATGGCTG
TGGCAGCGTCTCAGTTACTTTCTGAGGCCCACCGACATCGTGGTCACCGAGACCGGAACC
TCGTCCTTTGGAATCATCCAGACCAAGTTCCCCCACAACGTCCGAGGTATCTCGCAGGTG
CTGTGGGGCTCTATTGGATACTCGGTGGGAGCAGCCTGTGGAGCCTCCATTGCTGCACAG
GAGATTGACCCCCAGCAGCGAGTGATTCTGTTTGTGGGCGACGGCTCTCTTCAGCTGACG
GTGACCGAGATCTCGTGCATGATCCGCAACAACGTCAAGCCGTACATTTTTGTGCTCAAC
AACGACGGCTACACCATCGAGAGGCTCATTCACGGCGAAAACGCCTCGTACAACGATGTG
CACATGTGGAAGTACTCCAAGATTCTCGACACGTTCAACGCCAAGGCCCACGAGTCGATT
GTGGTCAACACCAAGGGCGAGATGGACGCTCTGTTCGACAACGAAGAGTTTGCCAAGCCC
GACAAGATCCGGCTCATTGAGGTCATGTGCGACAAGATGGACGCGCCTGCCTCGTTGATC
AAGCAGGCTGAGCTCTCTGCCAAGACCAACGTTTAGAGCATTATAGATGAATCATTTAAA
AAGAGATGACTTGTAGTACC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D10131g_CDS-001

Protein length: 572 aa.
Product: Pyruvate decarboxylase, putative
Gene: PDC1

>YALI0D10131g_CDS-001 MSDSEPQMVDLGDYLFARFKQLGVDSVFGVPGDFNLTLLDHVYNVDMRWVGNTNELNAGY
SADGYSRVKRLACLVTTFGVGELSAVAAVAGSYAEHVGVVHVVGVPSTSAENKHLLLHHT
LGNGDFRVFAQMSKLISEYTHHIEDPSEAADVIDTAIRIAYTHQRPVYIAVPSNFSEVDI
ADQARLDTPLDLSLQPNDPESQYEVIEEICSRIKAAKKPVILVDACASRYRCVDETKELA
KITNFAYFVTPMGKGSVDEDTDRYGGTYVGSLTAPATAEVVETADLIISVGALLSDFNTG
SFSYSYSTKNVVELHSDHVKIKSATYNNVGMKMLFPPLLEAVKKLVAETPDFASKALAVP
DTTPKIPEVPDDHITTQAWLWQRLSYFLRPTDIVVTETGTSSFGIIQTKFPHNVRGISQV
LWGSIGYSVGAACGASIAAQEIDPQQRVILFVGDGSLQLTVTEISCMIRNNVKPYIFVLN
NDGYTIERLIHGENASYNDVHMWKYSKILDTFNAKAHESIVVNTKGEMDALFDNEEFAKP
DKIRLIEVMCDKMDAPASLIKQAELSAKTNV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG