YALI0D10104g

Overview

Description The N-terminal domain is highly similar to uniprot|Q6CGU9 Yarrowia lipolytica YALI0A16038g, protein with a BAH chromatin binding domain
Locus type CDS
Locus tag YALI0D10104g

Location

Species Yarrowia lipolytica Positions 1277420..1279745
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2326 (nuc.)
Previous locus YALI0D10087g Next locus YALI0D10109g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D10104g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D10104gYALI0D10104g_mRNA-001YALI0D10104g_CDS-001

Nucleotide sequence

 

>YALI0D10104g
ATGACCAAAGAGTACACGGCAATTTACTCGCCAGAGGCCAAATCGGCGCCCAAGAACAAG
AAGAAAGCCGCGGTTCGCGCGATCAGAGACCAGGACAATGTGGAGATATCTGCTGGAGAT
GTGGTTCTTCTAAAAGACGATCCAGATGTGGAAGGCAAGGAGTTTGCATTGATCCAGGGT
CTCAAGCACGGTGATCAGGGACTGGAGGCCAAGTGTGTCTTGATGAAACTGTTCAACGAC
GCTGAGGCTCTCACTCCTAAGCATGTGATCCCCAATACAAACAAGAACAGGTACTCCAAG
GGTCAAGAGTTGGTTATGATGAACTCCATTGTGGATGTTCTTGTGGAGGAGCTGCATCTC
CCTGTCAATTGTTATTCGTTTGCTGAATTCGAGGCTCTCTCACGAGAAGACAAGAAGGGA
GACAATGTCTACTTTTGCAGATATGTGTTTGACAACGATGCCAACAAGACGTCTGTGGAG
TTTGACTGGCAAGATATCACCAAGGACATGTGTGGATTTATTGACATTCTTTACGAACTC
ATCACAGACAAGCCTCGAAAGCGAAGAGCAGCAGTTAAGGCTTCCAGACAGAGGAGTAGA
CATGCCCGAGATGAAGACGAGTCCGATTTCGAACTTGAGGAAGAGGAGGAAGAAGAGGAA
GAGGACGATATCGAGGATATTGACGAGGACGACGAATACGACAGTCCTGTAGAACAGGTC
AAAAAGGCTCGAACCCCAAAGTCTGCCAAAAAGAACACAAAAAAGGCACCAGCAACTACA
CCACGAAAACGAGCATTGGAAGACCTCGATCTACCGCAACCCGACCATAACACGACCCCA
ATGACCACGCCAAAAAAGAAACGAAAGACGGAAAATGGCCATGGACTGGCTACCCCCAAA
CGGTGAGTACTAGCAACCAACGACTCAAAGAACCCCAACTTCCAGCACACAACTAAAACA
GAACCGGCTGTGTCATCTCCTAACATAATTATCCCCTATTAACATGTAGAATGTTTTATA
AACAGGCCCTGTCCGACGCCACTTTACCCTATAAAACTGCAGATCTTTCACCTTCGAAAC
TGTCGCCCCATCAGTCAGCAAGAGCCAAACTTCACGTGGCCGCAGTACCCGACACGCTTC
CCTGCCGAGAAACGGAGTTCTCCAACGTTTATCTCGGCATCGAAAGTGCCATCAGATCAG
GCTCGGGAACCTGTATCTTTGTGTCTGGAACTCCGGGATCTGGCAAGACAGCCACTGTGA
GAGAGGTGGTGTCTCAGCTGCAGATTCGAGTGGAGGACAACGAGATTCCCGACTTTCTGT
TCGTAGAGCTCAATGGTATGAAACTGACCAACCCCCATACAACCTACGAGCTTCTGTGGG
AGCAACTATCAGGTGAACGTCTGGCCTACAACAATGCCATCAAGCTGCTGGAACACCGGT
TTCAGCAAAAGAGCAACGACACGCCTCTTGTTGTGGTTCTCGATGAACTGGACCAGCTGG
TGACTCTCAATCAGTCCGTCATGTACAACTTTTTCAACTGGCCCACCCTGCCGCACTCCA
AACTCATTGTGGTGGCCATTGCAAACACCATGGACCTGCCCGAACGAACGCTGTCAAATA
AAATCTCTTCCCGACTGGGACTCACACGGATCCAGTTTCCTGGTTACACGCATGAGCAGC
TCAAACTTATCATTGAGTCGCGACTAGGTGACATTGCGGAGTCCTCAGGAACAGTTGTGC
GTCCTGACGCTATCGAGTTTGCCTCCAGAAAGATTGCCTCTGTGTCTGGAGACGCTAGAC
GAGCGCTAGATCTGTGTAGACGCGCTGTGGAGATTGCCGAGTTGGACTCCGAAGAGGTGC
AGATCAAACACATTCAGCAGGCTGCCAACGAAGCAACCTCCACGCCCATCTACAACTACC
TTCAGGGTCTCCCTTTGGCTTTCAAAATCTTCCTGTGTGCTCTTCTGGCTCGAAAACGAC
GTAACGGTCTGCCCTCAGACTCCTTGGGGGACATTATTGAGGAGATTGAACGAATGATCA
AGAGCAGTGAAAACGCTGGTTTTCTGTCGCATATTCTACTACAGGGAGGTAAGAGGGTGC
GAATGGCGGGTTTCATGAATGCCGTAACCGAGCTGGTAGAGGCTGGTATTATCATTCAAC
AGAGCATCAAAGGAGAGAGATCTGCTCAGGTGAGACTCACAATTGGAGTAGAGGAGATTA
CCAGTGCCCTTAAGAACGATGACGACGTTAAGGGTATGCTATAAGCAGGCATAATTCAAT
CAATCATTTTCATGTACACATACCAATGCATCCAAACAGACATACC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D10104g_CDS-001

Protein length: 719 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D10104g_CDS-001 MTKEYTAIYSPEAKSAPKNKKKAAVRAIRDQDNVEISAGDVVLLKDDPDVEGKEFALIQG
LKHGDQGLEAKCVLMKLFNDAEALTPKHVIPNTNKNRYSKGQELVMMNSIVDVLVEELHL
PVNCYSFAEFEALSREDKKGDNVYFCRYVFDNDANKTSVEFDWQDITKDMCGFIDILYEL
ITDKPRKRRAAVKASRQRSRHARDEDESDFELEEEEEEEEEDDIEDIDEDDEYDSPVEQV
KKARTPKSAKKNTKKAPATTPRKRALEDLDLPQPDHNTTPMTTPKKKRKTENGHGLATPK
RMFYKQALSDATLPYKTADLSPSKLSPHQSARAKLHVAAVPDTLPCRETEFSNVYLGIES
AIRSGSGTCIFVSGTPGSGKTATVREVVSQLQIRVEDNEIPDFLFVELNGMKLTNPHTTY
ELLWEQLSGERLAYNNAIKLLEHRFQQKSNDTPLVVVLDELDQLVTLNQSVMYNFFNWPT
LPHSKLIVVAIANTMDLPERTLSNKISSRLGLTRIQFPGYTHEQLKLIIESRLGDIAESS
GTVVRPDAIEFASRKIASVSGDARRALDLCRRAVEIAELDSEEVQIKHIQQAANEATSTP
IYNYLQGLPLAFKIFLCALLARKRRNGLPSDSLGDIIEEIERMIKSSENAGFLSHILLQG
GKRVRMAGFMNAVTELVEAGIIIQQSIKGERSAQVRLTIGVEEITSALKNDDDVKGML*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG