YALI0D10087g

Overview

Description similar to uniprot|Q10225 Schizosaccharomyces pombe Hypothetical protein C13D6.04c in chromosome I
Locus type CDS
Locus tag YALI0D10087g

Location

Species Yarrowia lipolytica Positions 1275759..1277353
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1595 (nuc.)
Previous locus YALI0D10065g Next locus YALI0D10104g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D10087g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D10087gYALI0D10087g_mRNA-001YALI0D10087g_CDS-001

Nucleotide sequence

 

>YALI0D10087g
ATGGGTTTAAGTTGCAACCCAATCGCTTCATTATCACCATCACCAATGTCGGTCGAGCCG
AAATACAAAATCATCCAGCGGTTCGACGAGGAGGAAGACAAGCTGGCGACGACGGCCGTG
GCGCGGCAGGGCTCGCCGGACTTTGAGGGCTTTGCCGAGCTGTGTGACGCCGCTCGAAGC
GGAGATTTAGAACGAGTGGAGAAGGCTGTAGCGTTTGGAGTCAACGTGAACCAGATTGAC
GAGTTTGACTACTCGCCACTGATCCTGGCGTCGCTGTGCGGTCACTACGAGGTGGTGGAA
TACCTGCTCAATAACGGCGCCAAGTGCGACAGAGATACCTTCCAGGGCGAACGATGTCTG
TACGGGGCGCTGACAGACTCAATTAGACAGCTGTTGCTGAAGTTTGACATCTCCAAGGCT
GTAGACGCCACTCAGCCATTTTTGGCCCACCTGGCCAAGGTGTTTTCAAGGAAGCTGTTC
ACTGATGTCGTCTTCAAGGGAGTGTCTGACTCTGGAGAGACCGTGGAGATCAAGGCCCAC
AAGTTCTTTCTGGCAGCTCAGAGTCCGTATCTGACACAAGTGGTGGCAAGCAAGACGAAA
TCAGTCATCCCCATCATCGCCAATTTTGACGACTTTGAATACTGCATCCGCTACCTCTAC
TTCGTGGAGAGTGATGCCAAAGAGAGCAAGATCTCGCACAAGCTGGACATTACTTTTGAT
GACTTCTACTCGGTGGCTGTCAAGACCAAGCTTGCAGTGTACTTTGAAAAGCTGCTGGAC
CAAAAGATTACTACGTTCGAACCCGAGGAGGACGTCATTGACAAGCTGTCAGACCTGGAC
ACGTTCCCTGACGCTGCTATTTATACCCGAGACGAAGAAACAGGATCACGCACATACTAC
CCTGTCCACAAAATGCTGCTATCTCGGGTAGAGTACTTTTCGCTCATGTTCGGCACAGAC
TCCTTCCAGGGCATTGATACCATGTATGCCGAGGCTACGTCTTCGTTCCCTCTGTTGGAA
CTCGACCAGACCACTCCGGAGGTTGCAGAGATCTTCCTACAGTGGCTGTACACGGACAAG
TGCGAGATTCCTCGAGATCTGGCTCTGGATGTGCTGTTTTTGGCTGACTCTCTGTTTGCA
GACAAACTCAAGTCTCTGGCCGCCATTGTCATTTCCCAGGCCGAAACACCTGTTGCATCC
ATGGCAGACATTCTGAGAGCTGCTTGGGCCACCCGTATCGAGCGTCTCGAGCATTATGTG
GCTCAGCACATCTCCAACGACCTGGACGAATGGATCGATAAGGAGGAGTTTTTGGAACTG
GTGGAGGAGTCGGCTGGAAGAGTGACGGCTCGTCAGGAAACAGACACTATCGAGCTGGTC
GACGACGTGCGATACTACCTGGGCAAGAAATGGGGTGTCTTCGAGGAGGATCAGGATGAA
AAGACCGGCCGAGTGGACGAAGAGTTCAGAATCTCCCAGTACGAGCGACGTTACAACGAA
GACTTGGATCGAATCGACGATATGCTCGACAAGTTGAAGTTGGGTGCGTAACGGTTGGAG
CGGCGATTTATATATTAATGGAAGGGTGCATTGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D10087g_CDS-001

Protein length: 517 aa.
Product: Conserved hypothetical protein

>YALI0D10087g_CDS-001 MGLSCNPIASLSPSPMSVEPKYKIIQRFDEEEDKLATTAVARQGSPDFEGFAELCDAARS
GDLERVEKAVAFGVNVNQIDEFDYSPLILASLCGHYEVVEYLLNNGAKCDRDTFQGERCL
YGALTDSIRQLLLKFDISKAVDATQPFLAHLAKVFSRKLFTDVVFKGVSDSGETVEIKAH
KFFLAAQSPYLTQVVASKTKSVIPIIANFDDFEYCIRYLYFVESDAKESKISHKLDITFD
DFYSVAVKTKLAVYFEKLLDQKITTFEPEEDVIDKLSDLDTFPDAAIYTRDEETGSRTYY
PVHKMLLSRVEYFSLMFGTDSFQGIDTMYAEATSSFPLLELDQTTPEVAEIFLQWLYTDK
CEIPRDLALDVLFLADSLFADKLKSLAAIVISQAETPVASMADILRAAWATRIERLEHYV
AQHISNDLDEWIDKEEFLELVEESAGRVTARQETDTIELVDDVRYYLGKKWGVFEEDQDE
KTGRVDEEFRISQYERRYNEDLDRIDDMLDKLKLGA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG