YALI0D09999g

Overview

Description weakly similar to uniprot|P47048 Saccharomyces cerevisiae YJL049w Hypothetical 52.8 kDa protein in MTR4- GYP6 intergenic region
Locus type CDS
Locus tag YALI0D09999g

Location

Species Yarrowia lipolytica Positions 1264376..1265765
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1390 (nuc.)
Previous locus YALI0D09977g Next locus YALI0D10021g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D09999g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D09999gYALI0D09999g_mRNA-001YALI0D09999g_CDS-001

Nucleotide sequence

 

>YALI0D09999g
ATGTCGACCATGCTCAAAAGCGTTCTCAACTCGCCTTTTTTCAGCGACAATCGCCGCAAG
TCGCTCTATGGCAATTTCAGACGTCTCAAGACCACCAATACTGAGGGCTACGAGGCCAAC
ATCACCGCCTGGAAGTCTGTCATTCTTGATTTCTGCAGATCCAACCACCATGTGACCTTG
ACGACCGGCCCCAAACTGCTCAACGATCTCATCCTTGCTCCTCACGGCAAGCCACAGGGC
CTGGACATTGTTTTGGACCAACTGCAGGAACAGGAAGCCATCACCGACCTCAACACATAC
TTGGGGCGGTTCTACATGGACATTTGTGGCACCAGGCCTAGCGGTATTGCGTCCATGGTG
TCTTGGGGAGTTGCATCGCTCATGAGATCCTCTGGAATGGTCAAAAACCCGCTGGAAAAC
GCATCAAACGGACCTGGTACGCTCAAGGAACGCACATTTGTGGTTTCGGACCTGGTTCAG
GAGGCTGCAGAAACAGCGGTGGACTACAAGGGCTATGTTGGCAGCATCTACACGTTTGGG
GAGCTTGTGTGTGTGATCCAAAAGTCACAAAAGGGCTACAACGCCGTCGACGCCAAGTGC
ATTCTGTCCAGACTCTACAGTACAGGCAAGTGTTCCATCTCTCCGGGAACTGACATGGTC
GACGTGTCCAACTGTCCCGTTCACTACGACATTACCGTCATCAAGTTTGGCGATGGAAAG
GACCCCGTCACCGAACAGGACCGGTCTATCGCTACTCTCAAGCAGACCATGAATGATATC
CAGACCAAGATCACCACAATTGAGACTCGTATCGAGGAATGCACCAAGGAAGCGAAGCGA
TATCTGCAAAACAAGAACAAGAACACGGCGCTGTCGTATCTCAAGATGCGTAAGCTCAAT
GAGAAGTCGCTGGAGAACGCCTCTTCTTCTCTCGTCAAGCTGGAGGAGGTCATGCTGGCT
ATCGACAGCGCTGTGACTTCTCAACAAGTAGTGGGCCAGCTGGAGTCTTCCTCGGAGCTC
ATCAAGCGCATCAACAAGGAGATTGGAGGTGCCGAGAGAGTCAACAAGGTCATGGATGAG
TTTGACGAGCAGAAATCGCTGTCACGTGAGATCCAGGACGCCCTCGAACAGGACAATGTG
CCCGAGGAGGAGATTGATGACGAGCTCGCTCTCATGGAGGCCCAGGAGATGGCCAAGAAG
GGCGAGAAGGACGATCTTGTCGACAGGCTAGCGGACCAGTTTGGAGAACTCAAGATCCCC
ACCACAACGCCGTCTGCAGAGACAAAGTCCGAAGAGCTAAATGCCACAAGGCCGGAGGCT
CCACTACAGGCGTAGTGTATTTATTGATGACGAACCCTGTACATAGCCAATGCACATGTA
CTGTTTTGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D09999g_CDS-001

Protein length: 445 aa.
Product: Conserved hypothetical protein

>YALI0D09999g_CDS-001 MSTMLKSVLNSPFFSDNRRKSLYGNFRRLKTTNTEGYEANITAWKSVILDFCRSNHHVTL
TTGPKLLNDLILAPHGKPQGLDIVLDQLQEQEAITDLNTYLGRFYMDICGTRPSGIASMV
SWGVASLMRSSGMVKNPLENASNGPGTLKERTFVVSDLVQEAAETAVDYKGYVGSIYTFG
ELVCVIQKSQKGYNAVDAKCILSRLYSTGKCSISPGTDMVDVSNCPVHYDITVIKFGDGK
DPVTEQDRSIATLKQTMNDIQTKITTIETRIEECTKEAKRYLQNKNKNTALSYLKMRKLN
EKSLENASSSLVKLEEVMLAIDSAVTSQQVVGQLESSSELIKRINKEIGGAERVNKVMDE
FDEQKSLSREIQDALEQDNVPEEEIDDELALMEAQEMAKKGEKDDLVDRLADQFGELKIP
TTTPSAETKSEELNATRPEAPLQA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG