YALI0D10021g

Overview

Description weakly similar to uniprot|E3QXP9 Glomerella graminicola GLRG_10796 hypothetical protein
Locus type CDS
Locus tag YALI0D10021g

Location

Species Yarrowia lipolytica Positions 1268728..1270359
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1632 (nuc.)
Previous locus YALI0D09999g Next locus YALI0D10043g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D10021g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D10021gYALI0D10021g_mRNA-001YALI0D10021g_CDS-001

Nucleotide sequence

 

>YALI0D10021g
ATGAACCTGAACTGGAAAAAGATCAAACCCATCTCGCCAAAGCAGGCAGTACGAAACACC
CCAGACGTGGTCATGGGCGTCTCGGATGGTCTATACAGAATCCTGAGATCGAAACATCTC
TGGCTAAACTACTGCCTGATTCCGATCGGAACTATAGCCATGCTGGCCGTCTCTTACGCT
ACCAACTTGCTGTTCCAGCTCAAGCCGGTCGAATTCCCCGCATCGGTCATGGTCCTTGCG
GTTCTCTTCACCGGCATCATGGTCACCGAGCGAATCTTCGGCAGCAAGGTCTCCGATTTT
CTTATGCATTACTTCAACATCCCGGGCAGGTTTCTGCTCAAGTGGCTGGCTGTGTGCTTC
AGTGGCGCCTTCATCACCCTCCCTCTGTCGGAACACGTGACTGTGGGACAGGCATGGTCC
ATGGGCCTTATTTTCATCATCGGCCTGGCCTTCTACCTGGGTCTCTGCGCTTACATGGCT
CTGGCTGTGGACTGGTTTGTCAAGCTGTTCCACAAGGAGAAAATCAACGACGAAGAAAAA
CAGGTGGAAACGAGTTTTGACCAGATTGAAGAGCACAGTGGAGAAACAGACACGGCTACC
TCCACGGACTTGGAAAACGGAGAACCCATGGTGGACAACATCGTCATGAACCCCACGGAG
GCGGACAAGGTGGAAGAGGAGGAGAAACTTGAGCCAGAGGTACCTCTGACGGTGTTTGAG
AAAAGCTCCAACTTTGTATACGACAACTTTGACGACATTTTCTATTTTACCCTCTTTTGG
TGTGGACTGATTGTCTACTATGCCAGAGGATATGCCATGATCATGCACACTGCAATGGTT
GCCTTTGTGTTCCGACAAGTGAACAAACTGCCTCCCAAGCTCAAGCGATACCTTTCGCCT
GTTATCGTCACTGCTGGCATCTGCATGCTAATCATTCTCATCACTTCTCTGATTGGCAAC
CACCACAAGCCTCGAGACTTCATGAACGATCTTCGACACTTCAAAACCGGTCGAAACTAC
CTCTATCTCGTAAACAACTACCGACACTGGAACGAGGTCAACACTAACGGCATGTACCAT
CGGCTTCCAGGAGCTGGAGACGTGTACTCTTCATTCATGGACGCCGGTATCATTGCCATG
TTGGTTCCACTGTACGAGTACAGAGCCGAACTGATTGAGCATTGGATTATGCTCATTGTC
CCTATCGGATCTGGAGCCATCCACTTTTTCTGCTACCCGGCCATCTGTTACCGACTATGG
CTCACTTCTGAGCAGGCCTTGGGATTTGCAGCTCGTTCAGCGACTCTAGCCTTGGCTACT
CCTGTCACTGAGGGTCTCGGAGGCAACATCCAGGTCACAGCCGTTACTGGTGTGCTTTCT
GGTATTGTTGGAGTGCTCATTGGAGACTTTTTGCTCGAAAAGGTGTACCGAGTTCCAATG
GACAATTTCATGGTGGTAGGAATCACATATGGCACCAATTCCTCAGCTGTGGCTGCCACC
ACTCTTCTGGCTACCGATAGACGTACCGGAGCCATTGCATCCTTGTCTTTTGTGCTGTTT
GGAATCACCCTGGTGGTTCTCACGGCTATTCCTCCAGTGGCCAATGTTGCCAAGCATCTG
GCTGGAAAGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D10021g_CDS-001

Protein length: 544 aa.
Product: Conserved hypothetical protein

>YALI0D10021g_CDS-001 MNLNWKKIKPISPKQAVRNTPDVVMGVSDGLYRILRSKHLWLNYCLIPIGTIAMLAVSYA
TNLLFQLKPVEFPASVMVLAVLFTGIMVTERIFGSKVSDFLMHYFNIPGRFLLKWLAVCF
SGAFITLPLSEHVTVGQAWSMGLIFIIGLAFYLGLCAYMALAVDWFVKLFHKEKINDEEK
QVETSFDQIEEHSGETDTATSTDLENGEPMVDNIVMNPTEADKVEEEEKLEPEVPLTVFE
KSSNFVYDNFDDIFYFTLFWCGLIVYYARGYAMIMHTAMVAFVFRQVNKLPPKLKRYLSP
VIVTAGICMLIILITSLIGNHHKPRDFMNDLRHFKTGRNYLYLVNNYRHWNEVNTNGMYH
RLPGAGDVYSSFMDAGIIAMLVPLYEYRAELIEHWIMLIVPIGSGAIHFFCYPAICYRLW
LTSEQALGFAARSATLALATPVTEGLGGNIQVTAVTGVLSGIVGVLIGDFLLEKVYRVPM
DNFMVVGITYGTNSSAVAATTLLATDRRTGAIASLSFVLFGITLVVLTAIPPVANVAKHL
AGK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG