YALI0D09691g

Overview

Description similar to uniprot|P53972 Saccharomyces cerevisiae YNL022C Conserved protein of unknown function with seven beta-strand methyltransferase motif
Locus type CDS
Locus tag YALI0D09691g

Location

Species Yarrowia lipolytica Positions 1225261..1226824
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1564 (nuc.)
Previous locus YALI0D09669g Next locus YALI0D09713g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D09691g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D09691gYALI0D09691g_mRNA-001YALI0D09691g_CDS-001

Nucleotide sequence

 

>YALI0D09691g
ATGAACTTCTACCAGGAGGCCGCCCAGTTTCTGGAGCCGTCCAAGAAGGGCTCGCTACAG
AACCGAATATTTGCTCAGTCCAAGCTGCTCGGCAAAACGCGACTCAGAGCCGACCCCAAA
CATGTGTTTGCCGTGGTCTTCTCGGCCCTCAAATACAGACCCTTTCTGGTGGACATCATC
AAGGCTGCGGAAATCCCCATTTCCGACAAGCCTGGAAAAACCAAAATCACCATGAACATG
GCCATTCTTATGGCCCACGACCTGCTCTGCTCCCGGTCCAAGCGTCTGACCATCTCCAAG
GGTCCTCTCAAAGACATGTTTCTGGCCCACCAGACCCGTCTCAAGTCCGAGCTGACCAAA
TTCAAGCTGAAACACAAGGTCTCGGACCTCGACGAGCTCGTGGAGGAAGACTCGACGCCC
ATTCGATGGATAAGAATCAACACAGTGCTCAGTAACGAGGAAGAGTTTCACAAGACGCCT
TTGATCGCGAGACTCAAGCCTATCGACAAGATCGAGGGCGGCACAATTCAGCCCGGACAG
ATATACAAGGACATTCACGTGCCCCATCTTTACGGAATTCACCCCAGAGAGAAACTGGCT
AATTGCGAGCTATATAAGCAGGGCAAGATCATCATTCAAGATCGAGCCTCTTGCTTTCCC
GCTACCATTCTCAACCCCCAGCCTGGCCAGAAGCTCATTGATTGCTGCTCTGCACCCGGA
AACAAAACCACACACCTGGCCTCTTTCGTGGCTGGTACCCCTGGCTCTATTGATGCGTTT
GAAAAAGACGCCATTCGAGCAAAGCTTCTTACCAAGATGGTCAAGACCGCGGGTTGTCAC
AACTGCATCAAGGTGAACGTGGGAGACTTCACCGACACCAACCCCGACGACTACCCCGAA
GTGGAGGGTATTCTCGTGGACCCATCGTGTTCGGGATCAGGTATTTTTGGACGAAAGCAC
GAGGACGACGCTGCCGCGGCGGAGGAAACCAACAGAGACGACCAGAAGGATCAGTTCCGA
CTCCACAAGCTGTCCGAGTTTCAGTACCGAATCGTCAAGCATGCCCTGCTGTTTGGATCT
GCCAAGAAGGTGGTCTATTCTACCTGCTCCATTCACAACATTGAAAACGAGGAAGTGGTT
CAGAAACTGCTTCTGGACTCGCAGGTTGCTGCTGAGGGATGGCAGCTGGCCCCCAAGTTG
CGTGTTCTTCCTCTATGGACGCGACGAGGAGACCCCAACGGCTTTTCAGACTTTCCTGAG
AATCAGAGAGCTGCTCTGGCTGAGGGAGTCGTTCGAGCTCTACCCAAGGTCGACGGAGGC
ATTGGCTTCTTTGCTGCCTGCTTCGAGAAGCGGGATATTGGTGAAATTGGACACAGAGTC
CCTAAGGTGTCTGAGGTTGAGAGCGCCCAGGAAACCTCTTCCGATGACCACAGTGAAGAC
GCCGAACAGGAAGACCAAGACCAAGACCAAGACGAGGAGGAGGTTGAGTCTGAGGAAGAG
TGGACTGGTTTCTCTGATTAAATTCAAATAGAAAGTCATTTAGATCAAAACAGCATTGCA
TTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D09691g_CDS-001

Protein length: 507 aa.
Product: rRNA m5C methyltransferase, putative

>YALI0D09691g_CDS-001 MNFYQEAAQFLEPSKKGSLQNRIFAQSKLLGKTRLRADPKHVFAVVFSALKYRPFLVDII
KAAEIPISDKPGKTKITMNMAILMAHDLLCSRSKRLTISKGPLKDMFLAHQTRLKSELTK
FKLKHKVSDLDELVEEDSTPIRWIRINTVLSNEEEFHKTPLIARLKPIDKIEGGTIQPGQ
IYKDIHVPHLYGIHPREKLANCELYKQGKIIIQDRASCFPATILNPQPGQKLIDCCSAPG
NKTTHLASFVAGTPGSIDAFEKDAIRAKLLTKMVKTAGCHNCIKVNVGDFTDTNPDDYPE
VEGILVDPSCSGSGIFGRKHEDDAAAAEETNRDDQKDQFRLHKLSEFQYRIVKHALLFGS
AKKVVYSTCSIHNIENEEVVQKLLLDSQVAAEGWQLAPKLRVLPLWTRRGDPNGFSDFPE
NQRAALAEGVVRALPKVDGGIGFFAACFEKRDIGEIGHRVPKVSEVESAQETSSDDHSED
AEQEDQDQDQDEEEVESEEEWTGFSD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG