YALI0D09669g

Overview

Description weakly similar to uniprot|P38766 Saccharomyces cerevisiae YHR031C RRM3 DNA helicase involved in rDNA replication and Ty1 transposition
Locus type CDS
Locus tag YALI0D09669g

Location

Species Yarrowia lipolytica Positions 1222003..1224918
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2916 (nuc.)
Previous locus YALI0D09647g Next locus YALI0D09691g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D09669g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D09669gYALI0D09669g_mRNA-001YALI0D09669g_CDS-001

Nucleotide sequence

 

>YALI0D09669g
ATGGCTCGTCTCAACAAGGATGTTAGCGGAATTTCACACCGGCACGTGACAGCGCGCACC
GAAGAGCCTGAGCGGTACCAACGACAACGTCTGGAGGAGGGAGCAGTCCAGATCAACTCG
CTTATGCACCAACTACGAGAGAAAGAGTCGTCCGAGGGCGCTAGGGCCGGGCGTCAAAAC
ACCGAGGAAGACCGCATGGAGGTTGATGAGCCGGAGGAAGACGAGACTGATCTATTGCTT
GAACGAGAACGGCTTCTGGAGGAGGAACAGAGCATACTGGGACGACTGTCGGAGGGAGAG
CGACAGTCACAGGGACGGCATGAACCAAGGTACAGGGATGTGGCACAGATTCTTGAACGG
GAGAAGCAAAGGTCTAAGAAACGAGCCCATGCTAGCTCCAAGGACTCCGCCAAGAAACGT
ACCGCTCCGCCTGTTCAGATTCAAGATGAAAATATGTTCGTTCGGGACGACTGGTGGAAG
GAATGGACGCCCAAGGAGCTCGTGATGGTGGTGGCATACTACAAGCAGGATCTTCATCGT
GCTATGCAAAGTCATTCGGGCTTGAATCATGCTGAACTCACCGCTCTACAACTAGGAGAG
ATAAAGCGTCTGGTGAGACGAGACGCTAAGAAGATGCTCCTGGCCCAGTACAGCTCGTAT
CTGAACAAGATGCATGAAGCGCAAGAAAACCGTGGTGGCGAATGTTCTGAACCTGTGGTC
AAGCAAGACCCCTCAACGGCTCCTTCTCAAAACACAAACCTCCACACTGGTATGCCCAGA
TCCAGCCAACAGGCTGGCAAGAATTGCGAGAGCACCGCCAGCGACGACGAAACCGACGCT
GTGGCTGCCAACACCACTACTCTGTCGCTTCTGGAGCCCCAAAATATCACGCTCACTGAA
GAACAGCAGGTCATCTTTGACCTAGTGGCTAAAGGCGAGAGTCTGTTTTTCACGGGAGGA
GCTGGAACCGGAAAGTCCGTGCTCATCAAGGAGATCAAGAACCATTGCGAGTCTAAAGGA
GTTGTCTGCAAAGTCACAGCACCTACTGGTCTAGCTGCAGTCAACGTGGATGGCATAACT
ATTCATAGGTGGACTGGTCTGGGTCTCATGAAAGAGAGCGCCGAAGCCTGCATTGCCAAG
CTCTTCAACAACCCCAGGGCTGCCGCAATGTGGAAGTTCACCGAGGTGCTCATTATTGAC
GAGTGCAGTATGGTATCTGGAGCCATGTTTGACAAGATTGACACCATTGCCCGAGTCGTG
AGATCCAACTTTTTCCAAATTTCACAAAAGGCTGCTGTTCAGTATGAAAAGGAGCTACGC
TCTAAGAAAAAAGCTCGAAACTACAACTTTCTGAAAGAAATGTTACATTACACGGAGGAG
GACAATGAGCGTGACCAAATGTTGAAGGACCTCCCCTTTGGAGGAATACAAGTTGTTTGT
GTGGGCGACTTTTATCAGCTTCCCCCTGTTCCTTCGTTTGAAGACAAAAACGCATACGCC
AGAAAGCATGGTGCTGGCGCCCAGCTTCCTCCAGACTTTTTGTTTAACTCCGAGGCGTTT
CAGAAGGTGTTTGGAGCCAACAGACTGCGTCTCACTGTTGCCAAGCGTCAAACTGAGGGC
TCCGTGTTTTCCTCCATGCTCAACTTGTTCCGAACGTATAAAGGTACCACTCAAGAGACT
GATGCTCTTCGAAGCTACTTTTCTCAGTTCATTGGCAGGCATCCCCCGGGCCAACAAACT
GTTCACCTTCAAAGCACTATCAGTGGTGTCGAAGCAACTAATCAGAGAGAGCTGCAGCTG
CTAGACGGCCCTGAAGTCTTCTTTTACGCTTCTGACATGCGTAACACCACGGAGGGGTAC
AGTCAGGAATTCATTGATCGAGCCATGAGGGACATAAACGCTGAAGACAGGCTGTGTTTG
AAACCAGGTGCCCAGGTCATGTATCTTAAGAATGACTACGACAAGGGTTTGGTGAACGGT
CATATGGGTCAGGTTGCATTTCTCATGACCTACGAAATGTACAATCTGTACAAAGACGAT
CTGGATCTATTGTTTGCCATTTATCACTACATCAAGTCTAGAAACCTTCGTTCTCTGAGC
CGCAACGCCAAGATGCCTCCTGATCTGGAGCAACACCTTGGCATGCGTTTGGAGCATTAT
CAGTGGTGTTACTATCGGTACGCCCTGATGCACATTGACGAGGTGTATCGACAGGAGGCT
CTGGCTCAAAAGAAGAAGAATCGTGAGTTGGAAGAACAGAACAAGGTAGGTAGAGAGAAC
ACCAACCTACTGGTCGTCTTCAGACTTGCAGACGAGTACATTGCAGACGCTGAAAGTGAC
CAGCAGTTCTTCTTGGTGCCTACAGTTGAGTTCGAGAAGCTCGACTACTCTCGACTGCTG
GCTCGTGAGAATCGAGACGAAAACGCTCGAAAGTACCCTACCATTTGCTCGCGATTGCAG
CTGCCTATGAGTCTGTCTTGGGCACTCACGATTCACAAATGTCAGGGACAGACACTTATC
CGAACTGTGGTAGACATGAAGGGCATGTTCACCGAAGGACAAGCATACGTGGCCATGACC
CGGGTTCGGTCTCCCGATGATTTGAGGCTCACTTGTTTCGAGATCCCCAAAGTCACGCGT
CCTGAGGTCATCAAGTTTGATGAATCCATCAAGGACTCTCTGACGGTCAAGAAAGAAGGA
GCCAATGGCTTCGGTGGGTTTTTTGCGCTTCCACCAAACACAGCCCCTTCCCACTCGACT
CCTCTAAAATGTTCTTCTCCGGCCCCATCTTCATATGAGTCTGCAGCTAGTGATTTTGAT
TCAGACGCAGAAACATGTTCTCATTACACTAGTCAGAAGTAAGAGACTAGAAGTACAGTA
GTACAGGTACACACTAATTATCATATCATTATCATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D09669g_CDS-001

Protein length: 954 aa.
Product: Conserved hypothetical protein

>YALI0D09669g_CDS-001 MARLNKDVSGISHRHVTARTEEPERYQRQRLEEGAVQINSLMHQLREKESSEGARAGRQN
TEEDRMEVDEPEEDETDLLLERERLLEEEQSILGRLSEGERQSQGRHEPRYRDVAQILER
EKQRSKKRAHASSKDSAKKRTAPPVQIQDENMFVRDDWWKEWTPKELVMVVAYYKQDLHR
AMQSHSGLNHAELTALQLGEIKRLVRRDAKKMLLAQYSSYLNKMHEAQENRGGECSEPVV
KQDPSTAPSQNTNLHTGMPRSSQQAGKNCESTASDDETDAVAANTTTLSLLEPQNITLTE
EQQVIFDLVAKGESLFFTGGAGTGKSVLIKEIKNHCESKGVVCKVTAPTGLAAVNVDGIT
IHRWTGLGLMKESAEACIAKLFNNPRAAAMWKFTEVLIIDECSMVSGAMFDKIDTIARVV
RSNFFQISQKAAVQYEKELRSKKKARNYNFLKEMLHYTEEDNERDQMLKDLPFGGIQVVC
VGDFYQLPPVPSFEDKNAYARKHGAGAQLPPDFLFNSEAFQKVFGANRLRLTVAKRQTEG
SVFSSMLNLFRTYKGTTQETDALRSYFSQFIGRHPPGQQTVHLQSTISGVEATNQRELQL
LDGPEVFFYASDMRNTTEGYSQEFIDRAMRDINAEDRLCLKPGAQVMYLKNDYDKGLVNG
HMGQVAFLMTYEMYNLYKDDLDLLFAIYHYIKSRNLRSLSRNAKMPPDLEQHLGMRLEHY
QWCYYRYALMHIDEVYRQEALAQKKKNRELEEQNKVGRENTNLLVVFRLADEYIADAESD
QQFFLVPTVEFEKLDYSRLLARENRDENARKYPTICSRLQLPMSLSWALTIHKCQGQTLI
RTVVDMKGMFTEGQAYVAMTRVRSPDDLRLTCFEIPKVTRPEVIKFDESIKDSLTVKKEG
ANGFGGFFALPPNTAPSHSTPLKCSSPAPSSYESAASDFDSDAETCSHYTSQK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG