YALI0D09647g

Overview

Description weakly similar to uniprot|P05085 Saccharomyces cerevisiae YML099C ARG81 Zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type, involved in the regulation of arginine-responsive genes
Locus type CDS
Locus tag YALI0D09647g

Location

Species Yarrowia lipolytica Positions 1219557..1222024
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2468 (nuc.)
Previous locus YALI0D09625g Next locus YALI0D09669g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D09647g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D09647gYALI0D09647g_mRNA-001YALI0D09647g_CDS-001

Nucleotide sequence

 

>YALI0D09647g
ATGAACCGAACGAAATCCTTCGCAGGATGCTGGACGTGCCGAAACAGAAAGATCAAATGC
GATCTGCGCAGACCCACTTGCCAACGGTGCGAGAAGGCCAAGCTGGAGTGCGAAGGATAC
TCCATCAAGCTGAGATGGGCCCGGACCGGCAAGGAGGGCGAGGACGGAGAGGAGGAGATC
TTTCGCCGCCGCAACGTGGACTTTGTCGAGTACCCGCCAGAAATGACGTTTGAAACGTAC
CGCGAGATGGACATCACTCTGCAAAAACTCCACGCGCCAAAGTTCCAGGCTGACGAGACC
ATGGTTCTGGGACCCTTTGGCGTCTTCTCGGGATTTAAACGAAGACGCGTGGAGCTCCCA
CAGTCGCAGAACCAGCAGCCACAGATCAACTCCATTACCCCAAAGCATACGCCTCCTCAG
ATGGCCCAGGGACTGTCGCCAAACAAACAACAGCAGCAGCAACAGCAGCAGCAGCAACAG
CAGCAGCAGCAGCAGCAACAGCAACAACAACTACAACACCCTTCACAATCTCCGCATTCG
CATAACAACCAAGTAACACAATCTCCGCATCATGTCCACTCACCACATGTGCCGTCTCCG
CACGTGCAACCACCACACATCTCGCCTGAGAACTTGCACGCCGACCTGGACCTCGACATT
CTCATGAACAACCTGCCCGTGCACCCGCCCCAGATTCTGCCACTTACTTACTTCATAGAC
CCTAATCTGGAGATGCATGCTGACCACGACAATGAACCGCAGCCAGACTCGTCGCCAGCA
GGAGGAATCATCCACAGAAACATTGAACAGATGGAGGAGAACGAGGTGAACACAATTTTC
ACAATTGTCCAGAATGACCTGGCGGGAACTGCATTCCCCAAACTCCCGGCGTCCGAACTC
CAATTCTCAGACACACAGCTGCAATTCAGCTCGCAGTCCAGATACCTCCTGCACCACTAC
ATCACATCTGTGTCGCAAACCATGACCGTGGTGGGCCATCCGAGAAACCCCTGGATGCAA
ATCTTCGTGCCCAGGGCCATTTCGGCTATTGGAGACCTGGTTGCTACGGGATACACCACC
AACTCCAGAAACGCGCTCCTGCATGCCCTACTAGCCATCTCCGCATACAACCTGCAATCC
AAGTACCCCAAGAATTCGCTGAACCGAAAGCATTACTCGGAACTAGGTCTCAAGCTGAAA
TCCGAAGCATACAAACTGTTGTGGCCCTGCTTCACAGAAGATATCAGTGACCAAAAGTAC
AAAGACGTACTGGTGTCTATTCTGTCAATGGTTCCTATTGATGTGGTATCTGGAAGCATG
TCTGATTGCAGAGTGCATCTTTTGGCATGTCAAAAGTTCATTGAGATGCGTCTTTCTTCG
CGAAGAGATATATCTCCAAAGGCTGCCACTTTGCATCGAATTTTTTGTTTCCTTCGATTG
CTTCAGGAGTCTACGGTCTTCACAGATCTCATGGAAATCGACGACGAGGAGCTAAACGAA
GTCATTACGGATGATCAGGATATAGACACTATTCTGACTGGTGCTGACGGCTCAAAAATG
TCCGACAAAAAGCGTCTCAAGTTCTCAGATGCTGGTGGAGGTATTTTCCAGAAGGAAAAG
GACCCCAAGAAGCTCGGAAAGGACGACAGAAAGAACTCCCACGAAGGCTACTTTGACACT
CCCATTAAGAAGTCTCTCAAGGGCTCTCCTAATGCTCCTGTTCCTGGAACTCAGCGTCTC
AAAATTTCAGAATACTGGCTTGGACAGCCTGATCTGGCTCCATGCTCCGATTCGTTCGAT
CTGAGCTCCATTCTAGCCATGTATGGTCTTCCGGACTCTCTGCAGGCCCTTTTGTCTCGA
ACGACAGCTCTAGCCAAGCGATGCATCAGTTTTAGACAGAAAAAGGGCACAAACTATGAG
TCTGAGCAGATCCGTGTGCTCGAGCAGGATCTGTTGCAGTGGAGATTCGAGAAGAGCAAG
ATTGCGATACCCAGCTTCAACGACAACCGAAAGGCAGTATTGCATTACCACTGCATTTCG
TTCCATGGAGCTCTGGTCATCTACTTTTACCGCCTTGTTCTGGGCTGGCCTGCGTCCTCT
TTGCAGGACAGAGTCAAGTATCTGATGCACATTCTGCTGGAGATGCAAAATTTCAAGTCT
AAAGTGTCTGTAATTTCCACTCCTCTCTTGTGGGCCGGTTTTGTGGGTGCCTGTGAAGCT
CTGACGGAGGATACTCGACAGGGCTACACCAAGTACATTCAGGATCTGGCTGAATGTGGA
ATGGGAACTTACTACGTTCCCCGTAACGTCATCACCGAGGCCTGGAGGCTGCAGGATAAG
GGAGAGGAGAGCAACTGGTGGGACATTGTCCGTGATTGGGAAGCCCACTTGCTTTTGTCT
TGATGTGCTCGTCTCAATTATTGAGCTATTGTACAATATAATGAATAATGATAATGATAT
GATAATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D09647g_CDS-001

Protein length: 801 aa.
Product: Conserved hypothetical protein

>YALI0D09647g_CDS-001 MNRTKSFAGCWTCRNRKIKCDLRRPTCQRCEKAKLECEGYSIKLRWARTGKEGEDGEEEI
FRRRNVDFVEYPPEMTFETYREMDITLQKLHAPKFQADETMVLGPFGVFSGFKRRRVELP
QSQNQQPQINSITPKHTPPQMAQGLSPNKQQQQQQQQQQQQQQQQQQQQQLQHPSQSPHS
HNNQVTQSPHHVHSPHVPSPHVQPPHISPENLHADLDLDILMNNLPVHPPQILPLTYFID
PNLEMHADHDNEPQPDSSPAGGIIHRNIEQMEENEVNTIFTIVQNDLAGTAFPKLPASEL
QFSDTQLQFSSQSRYLLHHYITSVSQTMTVVGHPRNPWMQIFVPRAISAIGDLVATGYTT
NSRNALLHALLAISAYNLQSKYPKNSLNRKHYSELGLKLKSEAYKLLWPCFTEDISDQKY
KDVLVSILSMVPIDVVSGSMSDCRVHLLACQKFIEMRLSSRRDISPKAATLHRIFCFLRL
LQESTVFTDLMEIDDEELNEVITDDQDIDTILTGADGSKMSDKKRLKFSDAGGGIFQKEK
DPKKLGKDDRKNSHEGYFDTPIKKSLKGSPNAPVPGTQRLKISEYWLGQPDLAPCSDSFD
LSSILAMYGLPDSLQALLSRTTALAKRCISFRQKKGTNYESEQIRVLEQDLLQWRFEKSK
IAIPSFNDNRKAVLHYHCISFHGALVIYFYRLVLGWPASSLQDRVKYLMHILLEMQNFKS
KVSVISTPLLWAGFVGACEALTEDTRQGYTKYIQDLAECGMGTYYVPRNVITEAWRLQDK
GEESNWWDIVRDWEAHLLLS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG