YALI0D08910g

Overview

Description weakly similar to uniprot|G3ASV8 Spathaspora passalidarum sphingosine kinase-like protein
Locus type CDS
Locus tag YALI0D08910g

Location

Species Yarrowia lipolytica Positions 1138865..1139937
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1073 (nuc.)
Previous locus YALI0D08888g Next locus YALI0D08932g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08910g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08910gYALI0D08910g_mRNA-001YALI0D08910g_CDS-001

Nucleotide sequence

 

>YALI0D08910g
ATGGGACTCGTTATCGACGGAAAGGGCTGGAAAATCGCCAATGACGCGGCTGTCGAGTGT
GAAGCCGCGTCCGGCTTCGCTCCGGTCAAACACCTTCCTCATTTCGACAATCTCACCGTG
ATTGACAGCGTCAAGGCCGGAAAGGCCCGGTCAAATACATACTCCACAGCTCTCAAGCCA
CTGTTGGAAGCGGCTGGAATCAAACATAAATACATTGAGACGACCAGCCCGACAACAATT
GCAGAGTTTGCAGCATCTCTGGACTCGACAGGCGGCTCGTATCTGTTCATTTCAGGTGAC
ACCTCCATCCATGAGTTTCTGAACGGACTCAAGGACCCCAAACACTTTGAGGGAACCATC
TCCGTCATTCCTGCAGGCACGGGAAACGCGTTGGCCAACTCTCTGGAGCTGGGAAGCGTC
GAATCTGCCATTGAACGCTTCTTTCTGGGTAAACCAGAAAAGTTCCCCATCTACGTTGCA
ACCACAGGCGACAAGAGTCTGTACTCATTGGTGGTCATCTCCTACGGGTTCCATGCCAAT
CTCATTGCTCAGAGCGATACCCCCGAGTACAGAAAGCTGGGAAACGAACGGTTTCAAGTG
GTTGCCAAACAGCTGCTGGAACAACCGCAGAAATACAAGAGTAAGATCTACCTGGACAGA
AGCGAGGTACCGCTACCTAACGAAGAAACATCGTACGTGCTGTTCACTACCATGAAGATG
CTGGAGCCTGGATTCACAATCAGCCCAGAGGGAGACTGCAAGAGTCTGAATCTCGTCAGA
ATCGATGCCCCAGATAATCTCATGGAATACATGGTCATGGCGTACAATGGAGGCACGCAT
GTGAGGGAGAAAAATGTCGACTACATCAAAGCCAAGAATGTGCGATTGGAGACCCCCAAA
GACTCCGTCATCTGTGTAGACGGCTTCATTTTGACTAGTGATGGGATGGTTGATATTGAC
CTTGGTATGGAGGTTGATATTGTTGTTTGATATACAAGACTTTTGAACATTACGAGGTAC
GACAGTAAATATAAGTAGAAATGCTGTCAATAAATAATATGCTATAGGTGTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08910g_CDS-001

Protein length: 330 aa.
Product: Conserved hypothetical protein

>YALI0D08910g_CDS-001 MGLVIDGKGWKIANDAAVECEAASGFAPVKHLPHFDNLTVIDSVKAGKARSNTYSTALKP
LLEAAGIKHKYIETTSPTTIAEFAASLDSTGGSYLFISGDTSIHEFLNGLKDPKHFEGTI
SVIPAGTGNALANSLELGSVESAIERFFLGKPEKFPIYVATTGDKSLYSLVVISYGFHAN
LIAQSDTPEYRKLGNERFQVVAKQLLEQPQKYKSKIYLDRSEVPLPNEETSYVLFTTMKM
LEPGFTISPEGDCKSLNLVRIDAPDNLMEYMVMAYNGGTHVREKNVDYIKAKNVRLETPK
DSVICVDGFILTSDGMVDIDLGMEVDIVV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG