YALI0D08888g

Overview

Description weakly similar to uniprot|K1WHA4 Marssonina brunnea primase zinc finger
Locus type CDS
Locus tag YALI0D08888g

Location

Species Yarrowia lipolytica Positions 1136590..1138908
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2319 (nuc.)
Previous locus YALI0D08866g Next locus YALI0D08910g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08888g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08888gYALI0D08888g_mRNA-001YALI0D08888g_CDS-001

Nucleotide sequence

 

>YALI0D08888g
ATGACCGAGGAGCTTGAGGAAACGATTTCCAATCTCAAGGGAGATCTGCTGGACATGCAG
GAGCTCATTCTCAAAAAGGACCGGGAGATTCTGTGGCTGGGAGACGAGATGAAACGACTC
AAGAAGGCTCTGGAGAAGGCCCAGAGCAACAGCGTGGGTGAGAACCGTCAGGCGGGTTCT
AATTCACAGCAGAAGGCGACTACTTACAGTTTACAAGACAGTGATAAATTGGGTAAGTCG
GGCAAGTCGGGCACTCAGATTGAGTCTCCCAAGCAACTTGAGCAGCATGGCACGAAACCC
GTTGACAGTGTTTCACCAGAACCCAAGCCCATGGCTCCACCAACCTCTACAGTTCGTTCA
ACAACTCCTACAACAGCGTCGTCGACTGCTTCTTTGACAAAAAAAGAGTGGACGCCATAC
GAGCGAAAAGACCCGCTGATGGAGTTTGACGACATTCCTGGAATGGACGACTATGATGCT
CATCTGGACGAACTGCTCAACGGAGGACGACCCACTACACCTCCTCCAGTGTCTCAAAAG
CCCGAGGCTGTGGTGCAAGCCACGACACCCGTGCGAGCCAAATCAGCTCCACAGGTACTG
GGCACTCCGGAAAAGACTCGACAGAAGAACCTGGACATCTTGCACCAGGCACGCCAGAAC
CAGCTTCAAGAACAGCGGAAGGAGGAAGAAAGGAAGGAGTATGAGCGTCGTAATCTTGTG
ATTAAACCCGTCGAATCGATGGTAAAGAGAGAACAGGACCACGGTGCTTTTGCTAGAAGT
ATGATTGAGAAGACCGCAAAGTCGAAATCTCAACATGACACCAAAGAGAAGCAGCTGCAG
AAAAAACTGGATAACAAGGCTGCGGAATTGTCAGGAAAGAGAATCGGAAAGCAGCAAAGC
AAAGACCTACTGACTAAGTTCTTTCGTGGAGGACGAGAGGAACGTGAAAGGGGAGTCTTG
GCTATTGGTGAGGATACTGCACAGCAAGAGAACGACCCATTTGCCGACGAAGAGGATATC
TACAGTATGAATGAAAACCAGATGTTCTATCAAGGTAAAGCTGAAGATCCAGCGGCCTTG
AGACGTGAAGCTGACATGAAAAAGAAGGACCTTGACGAGACGTCTCTCTTCTTTCTCAGA
GAGCGGTTTCTATCACCGGAAGAAATCGACATAATGACAGAAGACATGAAGGTCTTCTCA
GTCACTGAGTGCCTACGAGCAGCACGAGGAGGAACGGATATGGATGAGCCCAGCTTCGCT
GTTTGCGGTGTGATTACCAGCGCCAATGTGCAAATGTACAACTACGGAGGTAGCACCAGG
AAGGTCATTAAGATGAGAATAGCCGATCTTGCGACACTGAAGGAGGAGTGGACTGTGTCT
CTGTCATGCAGAAAAGACGCCACGGATCGATGTTTGCATTGGCGGCCAGGATCTGTTGTG
ATTCTAGTGAACCCTGTGCTTGAAAGGTTCTATGTCACCAACAAGGATTCTGGTAAGAAG
CAGGAGGAGACGGGCTTCTCTATTAACTCTGGCGACAGCAATCTGGCTTTTGAGATCGGT
ATGACAGCCGACATTGGGCGTTGTGAGGCCAATACTCGGTCTGGAGAACAATGCAAGCGA
GTCATTTACAAGCGGAAGCTGGACGTGTGTATTCAGCACGCGGAGATACGAGAACGAGAA
AAGAAGAAGAAGGAGCAAATGGCCAAAAACGGAGTTTCGCGACTCAAGACTATTGATGGA
TCGTCTGCACCGCCCACATCGACCAGATCCGAATTCAACTCCGTACCAAGTCTGGTGAAG
GGCACCAAGATCACGTCTTTTAAACCTCAGGGACAGCCCATGCAAAGCAAGTCTTTCAAG
CGGCCTGCCGAAGAGGAACTTCGCAGACAAAGGAGGGAGAACGAAAAGATCACCGAGGAG
CTTCTCAAAAGCAACCCTCGGGTGGCAGAGACTGTGTTTGGTAAACAAGACAGCAAGAGA
GTACCTCTGCCGAAGCACATGAGTCAGCACCGGCATCCAGATGATATCAAGGTGTCTCGG
TACCAGGACGACAAGCGCATGAGCGACTACGTTCTTCAGAAGCCGGACAGGAAGAAAGCC
AAATCTGCATCTTCCACAGCTTCTAATGAGTCTTGTTCTATTCCGACAGGGCCAAGAGCT
ATGACTGAGGGCACCAAATCAGTAGTTGCCGAAGCTGCTCGAAAACAGGTTCTATTGGCT
CGAAATCAGGGGTTTCTTGACGACGACTCAGACTCCGACGGGCTTGAGATTGTGTAAACA
CCTATAGCATATTATTTATTGACAGCATTTCTACTTATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08888g_CDS-001

Protein length: 759 aa.
Product: Conserved hypothetical protein

>YALI0D08888g_CDS-001 MTEELEETISNLKGDLLDMQELILKKDREILWLGDEMKRLKKALEKAQSNSVGENRQAGS
NSQQKATTYSLQDSDKLGKSGKSGTQIESPKQLEQHGTKPVDSVSPEPKPMAPPTSTVRS
TTPTTASSTASLTKKEWTPYERKDPLMEFDDIPGMDDYDAHLDELLNGGRPTTPPPVSQK
PEAVVQATTPVRAKSAPQVLGTPEKTRQKNLDILHQARQNQLQEQRKEEERKEYERRNLV
IKPVESMVKREQDHGAFARSMIEKTAKSKSQHDTKEKQLQKKLDNKAAELSGKRIGKQQS
KDLLTKFFRGGREERERGVLAIGEDTAQQENDPFADEEDIYSMNENQMFYQGKAEDPAAL
RREADMKKKDLDETSLFFLRERFLSPEEIDIMTEDMKVFSVTECLRAARGGTDMDEPSFA
VCGVITSANVQMYNYGGSTRKVIKMRIADLATLKEEWTVSLSCRKDATDRCLHWRPGSVV
ILVNPVLERFYVTNKDSGKKQEETGFSINSGDSNLAFEIGMTADIGRCEANTRSGEQCKR
VIYKRKLDVCIQHAEIREREKKKKEQMAKNGVSRLKTIDGSSAPPTSTRSEFNSVPSLVK
GTKITSFKPQGQPMQSKSFKRPAEEELRRQRRENEKITEELLKSNPRVAETVFGKQDSKR
VPLPKHMSQHRHPDDIKVSRYQDDKRMSDYVLQKPDRKKAKSASSTASNESCSIPTGPRA
MTEGTKSVVAEAARKQVLLARNQGFLDDDSDSDGLEIV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG