YALI0D08932g

Overview

Description weakly similar to uniprot|P87236 Schizosaccharomyces pombe Hypothetical protein
Locus type CDS
Locus tag YALI0D08932g

Location

Species Yarrowia lipolytica Positions 1140313..1141598
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1286 (nuc.)
Previous locus YALI0D08910g Next locus YALI0D08954g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08932g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08932gYALI0D08932g_mRNA-001YALI0D08932g_CDS-001

Nucleotide sequence

 

>YALI0D08932g
ATGTCCTCTAGACGCCCCAGACGAATCAAAAAAACGCCCTTTCTCACCAAGGTCAAAAGC
TTTCCCTTTGATCTCTTCCTCAGCATCAATGAATCGCTAGCGGTGCTGGAACTCGACAAC
CTACCTCAGACCTACCACATCTACCTGGGTCTGGCGGCAGACATTACCATGATTCTCATC
CGGCTCTATTTTGTCAGATTCGAAACCAAAAAGAAGAGAGACGCGGCATTGTTCCACAGC
ATTGGAAACAACAAGGCTCGGGGCGGTTCGGGATACTACTCTCTGAGTGCACAAGCAGCA
GCCAAGAGACGATCCAGCAATGCAATCTACTCGATTCTGATGATGACGGCTCTGGCTCTG
TTTGCAATCTCTGTCATCAATATGCTAGTCTGCTTCCTCCAGACAAAAAAGTACACGCTG
TTTGGGAGAGATGTCTCCAACGTCCCCGGAACCCCCTCGGCCGCTCTAGAGCCTCTGGAA
ACACCTTGCGACGACCTGAACCAGTCTGGGGAAGCCCAATTCAAAACCATGATAAAAAAA
CGACTCTCCGGATTTATGAGCCCGGCTCCTGCTCCTCCAGTAGTCGACCCTACCACGACT
GATAGACCCACTCGAGTGTGGGTGCTCAACGTGTGGGAGCCGTCTCTGTTCCATCTCAAC
ATATTTGCGCTCTTCTCGCCTATACATGTCATTGCTCTGTGGTTCGGTCCGCTAAGCTTC
GTCCAGGTCTTCATTACTCTGCCCGCCTTTTCTTTCGCTCTGTATGCCATGAGCCACATG
TTCCTGGTCTACGTCAAGGACAAGAACATCATCTCGGGCGAGGTGCTCGGCGAGTTTGAC
AAGAAAGTCGTGCATCCTCTACTTGGAGTGATCAAGCAAGACGCTGCTGTTGGAGCTGAC
GGATCTTGTGAGTTCTACGACGCTGCGCTGGATAACAAGTCTGTTTACAGAGAGGCCGGC
ATGGCACCCAGCAAGCCTCCTACCCCTGTCAAACTGGACACCCCGACTCGTCGACGGACG
TTCGTGCCTACTTCCGGACAGCTCCCCGGAGCAGGTGCCCAAGCGGGTGACGGACTTCGC
CATTTCTCCCACAGACTGATGGATGACCGACGAGGCTCTTCAGGATACACCCCGTCCAGC
TTCGGCAACACCGGACCCAGTGTGCCCAACCATACCACATTGTCTGGATCTCCTGTTGGC
CGTCCTTGGAGGAGAAAGCAGTAGTGGACGTATAAATACGGCCCAACTACCAGTATATAT
TTAATTAATGCATTCCTTCATAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08932g_CDS-001

Protein length: 408 aa.
Product: Conserved hypothetical protein

>YALI0D08932g_CDS-001 MSSRRPRRIKKTPFLTKVKSFPFDLFLSINESLAVLELDNLPQTYHIYLGLAADITMILI
RLYFVRFETKKKRDAALFHSIGNNKARGGSGYYSLSAQAAAKRRSSNAIYSILMMTALAL
FAISVINMLVCFLQTKKYTLFGRDVSNVPGTPSAALEPLETPCDDLNQSGEAQFKTMIKK
RLSGFMSPAPAPPVVDPTTTDRPTRVWVLNVWEPSLFHLNIFALFSPIHVIALWFGPLSF
VQVFITLPAFSFALYAMSHMFLVYVKDKNIISGEVLGEFDKKVVHPLLGVIKQDAAVGAD
GSCEFYDAALDNKSVYREAGMAPSKPPTPVKLDTPTRRRTFVPTSGQLPGAGAQAGDGLR
HFSHRLMDDRRGSSGYTPSSFGNTGPSVPNHTTLSGSPVGRPWRRKQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG